RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 NXF5Q9H1B4 397 aaKnown RBP10.66□□□□□ -0.7
C9orf3-203ENST00000375315 SEMA5BQ9P283 1151 aa10.66□□□□□ -0.7
C9orf3-203ENST00000375315 TUBD1Q9UJT1 453 aa10.66□□□□□ -0.7
C9orf3-203ENST00000375315 TCF21O43680 179 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 OPN1MWP04001 364 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 OPN1MW2P0DN77 364 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 OPN1MW3P0DN78 364 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 FUT3P21217 361 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 NKAIN1Q4KMZ8 207 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 GPR157Q5UAW9 335 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 ABLIM2Q6H8Q1 611 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 C10orf53Q8N6V4 93 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 OTOSQ8NHW6 89 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 AMELYQ99218 206 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 CABLES2Q9BTV7 478 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 DNAJB12Q9NXW2 375 aaKnown RBP10.65□□□□□ -0.7
C9orf3-203ENST00000375315 CLDN16Q9Y5I7 305 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 KIR2DL5BA0A0G2JN68 375 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 KIR2DL5BA0A0G2JPC4 375 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 ITGB1BP1O14713 200 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 SIAH2O43255 324 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 ALDH3B1P43353 468 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 POLR2HP52434 150 aaKnown RBP10.65□□□□□ -0.7
C9orf3-203ENST00000375315 FHL5Q5TD97 284 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 WDR74Q6RFH5 385 aaPredicted RBP10.65□□□□□ -0.7
C9orf3-203ENST00000375315 PLXDC2Q6UX71 529 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 KIR2DL5AQ8N109 375 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 PTPMT1Q8WUK0 201 aaPredicted RBP10.65□□□□□ -0.7
C9orf3-203ENST00000375315 PPP1R14AQ96A00 147 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 FAAP24Q9BTP7 215 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 ZNF700Q9H0M5 742 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 OR51B6Q9H340 312 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 LPAR2Q9HBW0 351 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 WFDC1Q9HC57 220 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 GPR173Q9NS66 373 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 LANCL2Q9NS86 450 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 GRHPRQ9UBQ7 328 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 HHLA2Q9UM44 414 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 C14orf166Q9Y224 244 aaKnown RBP10.65□□□□□ -0.7
C9orf3-203ENST00000375315 LIPGQ9Y5X9 500 aa10.65□□□□□ -0.7
C9orf3-203ENST00000375315 CACNA1CQ13936 2221 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 H7C1C5 153 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 NUDT14O95848 222 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 FGF5P12034 268 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 GLRA1P23415 457 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 OR3A2P47893 321 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 LCN6P62502 163 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 TRA2AQ13595 282 aaKnown RBP eCLIP10.64□□□□□ -0.71
C9orf3-203ENST00000375315 TAF9Q16594 264 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 ALG10Q5BKT4 473 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 HLA-DQA1Q5Y7H0 255 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 EMG1Q92979 244 aaKnown RBP10.64□□□□□ -0.71
C9orf3-203ENST00000375315 NAT6Q93015 286 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 B3GALT5Q9Y2C3 310 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 PPP5D1E7EU14 171 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 CD82P27701 267 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 NOVA1P51513 510 aaKnown RBP10.64□□□□□ -0.71
C9orf3-203ENST00000375315 CCL20P78556 96 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 PNRC1Q12796 327 aaPredicted RBP10.64□□□□□ -0.71
C9orf3-203ENST00000375315 HIST1H2AAQ96QV6 131 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 DIRC2Q96SL1 478 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 LPAR4Q99677 370 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 NUDT16L1Q9BRJ7 211 aaKnown RBP10.64□□□□□ -0.71
C9orf3-203ENST00000375315 SRD5A3Q9H8P0 318 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 A0A1W2PPQ1 181 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 SCGB1D1O95968 90 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 CYB5R3P00387 301 aaPredicted RBP10.64□□□□□ -0.71
C9orf3-203ENST00000375315 PNPP00491 289 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 HLA-DQA2P01906 255 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 RPS2P15880 293 aaKnown RBP10.64□□□□□ -0.71
C9orf3-203ENST00000375315 ZNF117Q03924 483 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 SLC26A10Q8NG04 563 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 ACY3Q96HD9 319 aa10.64□□□□□ -0.71
C9orf3-203ENST00000375315 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.64□□□□□ -0.71
C9orf3-203ENST00000375315 H0YIG0 161 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 BPNT1O95861 308 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 KNG1P01042 644 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 COL10A1Q03692 680 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 MFGE8Q08431 387 aaPredicted RBP10.63□□□□□ -0.71
C9orf3-203ENST00000375315 PMS2P11Q13670 270 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 ZNF506Q5JVG8 444 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 SLC18B1Q6NT16 456 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 KCTD18Q6PI47 426 aaPredicted RBP10.63□□□□□ -0.71
C9orf3-203ENST00000375315 SLC23A3Q6PIS1 610 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 BTNL3Q6UXE8 466 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 NOXO1Q8NFA2 376 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 FGGYQ96C11 551 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 ANGPTL4Q9BY76 406 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 CNTD2Q9H8S5 307 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 LOC400499M0QZD8 3231 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 FAM230AA0A1W2PPH8 454 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 CT45A8P0DMV1 189 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 CT45A9P0DMV2 189 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 AMY2BP19961 511 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 RPS18P62269 152 aaKnown RBP10.63□□□□□ -0.71
C9orf3-203ENST00000375315 UNC119Q13432 240 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 OR5I1Q13606 314 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 ICAM4Q14773 271 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 CT45A2Q5DJT8 189 aa10.63□□□□□ -0.71
C9orf3-203ENST00000375315 EMC4Q5J8M3 183 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms