RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 SGK494Q96LW2 274 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 GKN1Q9NS71 199 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 V9GYS6 101 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 KIR2DS5A0A0G2JLQ3 304 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 A0A0G2JNG1 304 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 ZNF726A6NNF4 738 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 J3QR06 171 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 ERI3O43414 337 aaKnown RBP7.8□□□□□ -1.16
UBR4-201ENST00000375218 RPA3P35244 121 aaPredicted RBP7.8□□□□□ -1.16
UBR4-201ENST00000375218 ACVRL1P37023 503 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 MELKQ14680 651 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 KIR2DS5Q14953 304 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 HBMQ6B0K9 141 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 CANT1Q8WVQ1 401 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 RNF183Q96D59 192 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 RDH12Q96NR8 316 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 ATG2BQ96BY7 2078 aa7.8□□□□□ -1.16
UBR4-201ENST00000375218 ZFC3H1O60293 1989 aaKnown RBP7.79□□□□□ -1.16
UBR4-201ENST00000375218 WISP1O95388 367 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 ELK3P41970 407 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 CDX1P47902 265 aaPredicted RBP7.79□□□□□ -1.16
UBR4-201ENST00000375218 TFPI2P48307 235 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 RPL8P62917 257 aaKnown RBP7.79□□□□□ -1.16
UBR4-201ENST00000375218 SNAI3Q3KNW1 292 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 APRG1Q8IVJ8 170 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 UBALD2Q8IYN6 164 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 FNDC9Q8TBE3 224 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 Q96M66 194 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 Q96MF0 132 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 MRPL57Q9BQC6 102 aaKnown RBP7.79□□□□□ -1.16
UBR4-201ENST00000375218 LRTM1Q9HBL6 345 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 SCML2Q9UQR0 700 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 TRBV9A0A0B4J1U6 114 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 A0A1B0GTI1 187 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 SPAARA0A1B0GVQ0 90 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 A0A1W2PPI3 338 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 ZNF814B7Z6K7 855 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 RBFOX2O43251 390 aaKnown RBP eCLIP7.79□□□□□ -1.16
UBR4-201ENST00000375218 HLA-DQB2P05538 268 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 IL6RP08887 468 aaPredicted RBP7.79□□□□□ -1.16
UBR4-201ENST00000375218 HIST1H2AGP0C0S8 130 aaPredicted RBP7.79□□□□□ -1.16
UBR4-201ENST00000375218 RCC1P18754 421 aaPredicted RBP7.79□□□□□ -1.16
UBR4-201ENST00000375218 BRS3P32247 399 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 GGTLC2Q14390 218 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 ZNF266Q14584 549 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 TMEM200BQ69YZ2 307 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 UNQ6126/PRO20091Q6UXV3 157 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.79□□□□□ -1.16
UBR4-201ENST00000375218 KLHDC1Q8N7A1 406 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 HIST1H2ACQ93077 130 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 FBXO6Q9NRD1 293 aaPredicted RBP7.79□□□□□ -1.16
UBR4-201ENST00000375218 RBFOX1Q9NWB1 397 aaKnown RBP7.79□□□□□ -1.16
UBR4-201ENST00000375218 LAMTOR2Q9Y2Q5 125 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 HDGFL3Q9Y3E1 203 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 COL12A1Q99715 3063 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 CR2P20023 1033 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 GAS1P54826 345 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 GUSBP1Q15486 140 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 IER5LQ5T953 404 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 TCF24Q7RTU0 167 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 PPP1R32Q7Z5V6 425 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 RXFP4Q8TDU9 374 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 SH2D2AQ9NP31 389 aa7.79□□□□□ -1.16
UBR4-201ENST00000375218 EXOSC4Q9NPD3 245 aaKnown RBP7.79□□□□□ -1.16
UBR4-201ENST00000375218 J3QL48 77 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 FGF10O15520 208 aaPredicted RBP7.78□□□□□ -1.16
UBR4-201ENST00000375218 TIMP1P01033 207 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 PAX1P15863 534 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 FAM174BQ3ZCQ3 159 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 MBOAT2Q6ZWT7 520 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 OR4N5Q8IXE1 308 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 OR1J2Q8NGS2 313 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 GPR119Q8TDV5 335 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 RCN3Q96D15 328 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 C20orf144Q9BQM9 153 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 NDFIP1Q9BT67 221 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 TAPBPLQ9BX59 468 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 LINC00470Q9BZP3 86 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 TRAPPC2LQ9UL33 140 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 COL27A1Q8IZC6 1860 aaPredicted RBP7.78□□□□□ -1.16
UBR4-201ENST00000375218 NKX2-6A6NCS4 301 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 KCNK2O95069 426 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 DANCRP0C864 163 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 CD37P11049 281 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 FBXL22Q6P050 247 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 CD164L2Q6UWJ8 174 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 PDZD9Q8IXQ8 264 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 IZUMO1Q8IYV9 350 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 OR13C8Q8NGS7 320 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 OR2G2Q8NGZ5 317 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 UPRTQ96BW1 309 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 SEC22AQ96IW7 307 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 PGLYRP3Q96LB9 341 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 ZBP1Q9H171 429 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 GPR35Q9HC97 309 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 DOK5Q9P104 306 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 SERINC4A6NH21 518 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 A8MVM7 634 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 GABRG2P18507 467 aa7.78□□□□□ -1.16
UBR4-201ENST00000375218 OPRL1P41146 370 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms