RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 HIST1H2BCP62807 126 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 SRSF4Q08170 494 aaKnown RBP6.89□□□□□ -1.31
USP48-203ENST00000374732 HIST2H2BEQ16778 126 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 CD300EQ496F6 205 aaPredicted RBP6.89□□□□□ -1.31
USP48-203ENST00000374732 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.89□□□□□ -1.31
USP48-203ENST00000374732 DET1Q7L5Y6 550 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 LILRA3Q8N6C8 439 aaPredicted RBP6.89□□□□□ -1.31
USP48-203ENST00000374732 SAMD12Q8N8I0 201 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 OR5AN1Q8NGI8 311 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 HIST1H2BHQ93079 126 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 NEIL2Q969S2 332 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 HIST1H2BNQ99877 126 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 HIST1H2BMQ99879 126 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 OR5AC2Q9NZP5 309 aa6.89□□□□□ -1.31
USP48-203ENST00000374732 A0A1B0GW64 132 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 ODAMA1E959 279 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 MSTNO14793 375 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 PHF1O43189 567 aaPredicted RBP6.88□□□□□ -1.31
USP48-203ENST00000374732 SBK3P0C264 359 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 ZNF19P17023 458 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 CXCL3P19876 107 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 HGFACQ04756 655 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 PTPRNQ16849 979 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 FBXW12Q6X9E4 464 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 ADGRE4PQ86SQ3 457 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 LAS2Q8IYD9 372 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 SPEM1Q8N4L4 309 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 ZNF611Q8N823 705 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 PITX2Q99697 317 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 TBL1YQ9BQ87 522 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 EGLN3Q9H6Z9 239 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 NOX4Q9NPH5 578 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 ST6GALNAC2Q9UJ37 374 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 OR4C46A6NHA9 309 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 DCTN6O00399 190 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 ZNF195O14628 629 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 PLA2G10O15496 165 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 EIF4E2O60573 245 aaKnown RBP6.88□□□□□ -1.31
USP48-203ENST00000374732 CXCL2P19875 107 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 PYCR1P32322 319 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 POLR2LP62875 67 aaKnown RBP6.88□□□□□ -1.31
USP48-203ENST00000374732 TAL2Q16559 108 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 TMEM255AQ5JRV8 349 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 ZNF776Q68DI1 518 aaPredicted RBP6.88□□□□□ -1.31
USP48-203ENST00000374732 OR2T2Q6IF00 324 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 GLIPR1L1Q6UWM5 242 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 LINC00336Q6ZUF6 198 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 TMEM173Q86WV6 379 aaPredicted RBP6.88□□□□□ -1.31
USP48-203ENST00000374732 C11orf44Q8N8P7 122 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 NRTNQ99748 197 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 BARX1Q9HBU1 254 aaPredicted RBP6.88□□□□□ -1.31
USP48-203ENST00000374732 SLC17A5Q9NRA2 495 aa6.88□□□□□ -1.31
USP48-203ENST00000374732 PHPT1Q9NRX4 125 aaPredicted RBP6.88□□□□□ -1.31
USP48-203ENST00000374732 A0A087X0K7 114 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 A0A096LPK6 155 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 TMEM189A5PLL7 270 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 FABP5P3A8MUU1 101 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 G3V2L1 256 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 ERI3O43414 337 aaKnown RBP6.87□□□□□ -1.31
USP48-203ENST00000374732 CPMP14384 443 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 PSMB9P28065 219 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 IMPA1P29218 277 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 PTH2RP49190 550 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 BCL2L1Q07817 233 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 TMEM267Q0VDI3 215 aaPredicted RBP6.87□□□□□ -1.31
USP48-203ENST00000374732 DMRTC1Q5HYR2 192 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 DUSP18Q8NEJ0 188 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 C8orf46Q8TAG6 207 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 C8orf44Q96CB5 159 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 ATG5Q9H1Y0 275 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 TXNIPQ9H3M7 391 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 RNF167Q9H6Y7 350 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 DLL4Q9NR61 685 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 SERTAD4Q9NUC0 356 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 PRSS50Q9UI38 385 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 FBXO4Q9UKT5 387 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 BOKQ9UMX3 212 aaPredicted RBP6.87□□□□□ -1.31
USP48-203ENST00000374732 IGLV3-10A0A075B6K4 115 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 LRP5LA4QPB2 252 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.87□□□□□ -1.31
USP48-203ENST00000374732 FAM20BO75063 409 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 CDRT1O95170 752 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 SYNGR4O95473 234 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 REG1AP05451 166 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 MTCP1P56278 107 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 MEF2BQ02080 365 aaPredicted RBP6.87□□□□□ -1.31
USP48-203ENST00000374732 VWA2Q5GFL6 755 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 CD163Q86VB7 1156 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 DIRAS2Q96HU8 199 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 MGLLQ99685 303 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 DOHHQ9BU89 302 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 TSSK6Q9BXA6 273 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 IKZF5Q9H5V7 419 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 NMRAL1Q9HBL8 299 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 MYO16Q9Y6X6 1858 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 A0A0J9YY10 115 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 CCDC195A0A1B0GUA6 201 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 A0A1B0GX78 115 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 TMEM235A6NFC5 223 aa6.87□□□□□ -1.31
USP48-203ENST00000374732 MT-CO3P00414 261 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms