RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 DUSP13Q9UII6 198 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 A0A1B0GW55 424 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 HSPA12AO43301 675 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 IGHV2-70P01814 119 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 DUX4L2P0CJ85 424 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 DUX4L3P0CJ86 424 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 DUX4L4P0CJ87 422 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 DUX4L5P0CJ88 424 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 DUX4L6P0CJ89 424 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 DUX4L7P0CJ90 424 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 SRD5A2P31213 254 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 RAB2AP61019 212 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 RAP2BP61225 183 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 SLC10A1Q14973 349 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 OR56B1Q8NGI3 324 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 OR14K1Q8NGZ2 314 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 C15orf40Q8WUR7 153 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 TMED6Q8WW62 240 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 PRRT1Q99946 306 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 MAGT1Q9H0U3 335 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 CRIM1Q9NZV1 1036 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 DUX4Q9UBX2 424 aa9.4□□□□□ -0.9
CXCL12-203ENST00000374429 TMEM265A0A087WTH1 108 aa9.4□□□□□ -0.91
CXCL12-203ENST00000374429 MCRIP1C9JLW8 97 aa9.4□□□□□ -0.91
CXCL12-203ENST00000374429 F8VVB4 439 aa9.4□□□□□ -0.91
CXCL12-203ENST00000374429 F8VWA3 439 aa9.4□□□□□ -0.91
CXCL12-203ENST00000374429 PRAF2O60831 178 aa9.4□□□□□ -0.91
CXCL12-203ENST00000374429 CRYBA1P05813 215 aa9.4□□□□□ -0.91
CXCL12-203ENST00000374429 HPNP05981 417 aa9.4□□□□□ -0.91
CXCL12-203ENST00000374429 EIF2S3P41091 472 aaKnown RBP9.4□□□□□ -0.91
CXCL12-203ENST00000374429 RBP2P50120 134 aa9.4□□□□□ -0.91
CXCL12-203ENST00000374429 RSPO1Q2MKA7 263 aaPredicted RBP9.4□□□□□ -0.91
CXCL12-203ENST00000374429 RAB12Q6IQ22 244 aa9.4□□□□□ -0.91
CXCL12-203ENST00000374429 FADS6Q8N9I5 356 aa9.4□□□□□ -0.91
CXCL12-203ENST00000374429 OR10AD1Q8NGE0 317 aa9.4□□□□□ -0.91
CXCL12-203ENST00000374429 STARD10Q9Y365 291 aa9.4□□□□□ -0.91
CXCL12-203ENST00000374429 PTPRQQ9UMZ3 2332 aa9.4□□□□□ -0.91
CXCL12-203ENST00000374429 LILRA1O75019 489 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 NEURL1O76050 574 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 EIF2S3LQ2VIR3 472 aaKnown RBP9.39□□□□□ -0.91
CXCL12-203ENST00000374429 PEG10Q86TG7 708 aaKnown RBP9.39□□□□□ -0.91
CXCL12-203ENST00000374429 FOXRED1Q96CU9 486 aaPredicted RBP9.39□□□□□ -0.91
CXCL12-203ENST00000374429 TCEAL7Q9BRU2 100 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 ZNF552Q9H707 407 aaPredicted RBP9.39□□□□□ -0.91
CXCL12-203ENST00000374429 GPR35Q9HC97 309 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 CELA3BP08861 270 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 TAS2R60P59551 318 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 IZUMO4Q1ZYL8 232 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 RNF212Q495C1 297 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 REG4Q9BYZ8 158 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 WDR13Q9H1Z4 485 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 HRH4Q9H3N8 390 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 WASF3Q9UPY6 502 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 C14orf166Q9Y224 244 aaKnown RBP9.39□□□□□ -0.91
CXCL12-203ENST00000374429 TIMM10BQ9Y5J6 103 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 ZNF732B4DXR9 585 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 VAMP5O95183 116 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 IFI6P09912 130 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 IGFBP3P17936 291 aaPredicted RBP9.39□□□□□ -0.91
CXCL12-203ENST00000374429 FCGR2CP31995 323 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 TPRX1Q8N7U7 411 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 OR51H1Q8NH63 302 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 METTL9Q9H1A3 318 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 SLC26A1Q9H2B4 701 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 SLCO5A1Q9H2Y9 848 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 PNRC2Q9NPJ4 139 aaKnown RBP9.39□□□□□ -0.91
CXCL12-203ENST00000374429 TMEM38BQ9NVV0 291 aa9.39□□□□□ -0.91
CXCL12-203ENST00000374429 C9orf170A2RU37 121 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 ZNF503-AS2A6NEH8 195 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 H3BP45 60 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 HSD17B6O14756 317 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 CTDSPLO15194 276 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 OR5H8P0DN80 308 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 CEBPDP49716 269 aaPredicted RBP9.38□□□□□ -0.91
CXCL12-203ENST00000374429 GSK3AP49840 483 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 RNFT1Q5M7Z0 435 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 ETFRF1Q6IPR1 90 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 TMEM185AQ8NFB2 350 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 TERB2Q8NHR7 220 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 GLYATL2Q8WU03 294 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 ADAT1Q9BUB4 502 aaKnown RBP9.38□□□□□ -0.91
CXCL12-203ENST00000374429 MRI1Q9BV20 369 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 DNAJB11Q9UBS4 358 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 ZNF705EA8MWA4 302 aaPredicted RBP9.38□□□□□ -0.91
CXCL12-203ENST00000374429 PMS2P2O95744 297 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 ECH1Q13011 328 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 ZNF239Q16600 458 aaKnown RBP9.38□□□□□ -0.91
CXCL12-203ENST00000374429 IAH1Q2TAA2 248 aaPredicted RBP9.38□□□□□ -0.91
CXCL12-203ENST00000374429 HACD4Q5VWC8 232 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 DEGS2Q6QHC5 323 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 DRAM2Q6UX65 266 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 GGNQ86UU5 652 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 TGIF2LXQ8IUE1 241 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 FDCSPQ8NFU4 85 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 SULT4A1Q9BR01 284 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 SUCNR1Q9BXA5 334 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 AK3Q9UIJ7 227 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 RNF150Q9ULK6 438 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 LRBAP50851 2863 aa9.38□□□□□ -0.91
CXCL12-203ENST00000374429 IGKV1-27A0A075B6S5 117 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms