RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 SH2D2AQ9NP31 389 aa9.91□□□□□ -0.82
PTPN20-204ENST00000374346 FAM86C1Q9NVL1 165 aa9.91□□□□□ -0.82
PTPN20-204ENST00000374346 IGKV1-27A0A075B6S5 117 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 CCDC187A0A096LP49 1063 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 TERTO14746 1132 aaKnown RBP9.9□□□□□ -0.82
PTPN20-204ENST00000374346 YKT6O15498 198 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 DIRAS3O95661 229 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 UMODP07911 640 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 B4GALT1P15291 398 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 PTAFRP25105 342 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 MLF1P58340 268 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 ZNF266Q14584 549 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 TSC22D1Q15714 1073 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 PIGYQ3MUY2 71 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 PLCXD3Q63HM9 321 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 OR2Y1Q8NGV0 311 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 SFT2D1Q8WV19 159 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 ZNF442Q9H7R0 627 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 C19orf12Q9NSK7 152 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 ATPIF1Q9UII2 106 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 HS3ST3B1Q9Y662 390 aa9.9□□□□□ -0.82
PTPN20-204ENST00000374346 ZNF816-ZNF321PA0A0X1KG74 233 aa9.9□□□□□ -0.83
PTPN20-204ENST00000374346 XRCC2O43543 280 aa9.9□□□□□ -0.83
PTPN20-204ENST00000374346 NME2P1O60361 137 aa9.9□□□□□ -0.83
PTPN20-204ENST00000374346 MT-ND4LP03901 98 aa9.9□□□□□ -0.83
PTPN20-204ENST00000374346 FUT3P21217 361 aa9.9□□□□□ -0.83
PTPN20-204ENST00000374346 FOLR3P41439 243 aa9.9□□□□□ -0.83
PTPN20-204ENST00000374346 ID4P47928 161 aa9.9□□□□□ -0.83
PTPN20-204ENST00000374346 HLA-BQ31612 363 aa9.9□□□□□ -0.83
PTPN20-204ENST00000374346 RIPPLY2Q5TAB7 128 aa9.9□□□□□ -0.83
PTPN20-204ENST00000374346 ZNF775Q96BV0 537 aaPredicted RBP9.9□□□□□ -0.83
PTPN20-204ENST00000374346 MSI2Q96DH6 328 aaKnown RBP9.9□□□□□ -0.83
PTPN20-204ENST00000374346 FOXB1Q99853 325 aa9.9□□□□□ -0.83
PTPN20-204ENST00000374346 SPIN2AQ99865 258 aa9.9□□□□□ -0.83
PTPN20-204ENST00000374346 SPIN2BQ9BPZ2 258 aa9.9□□□□□ -0.83
PTPN20-204ENST00000374346 TUBA4BQ9H853 241 aa9.9□□□□□ -0.83
PTPN20-204ENST00000374346 M0R036 132 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 KLF7O75840 302 aaPredicted RBP9.89□□□□□ -0.83
PTPN20-204ENST00000374346 CDS2O95674 445 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 GLAP06280 429 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 KCNJ3P48549 501 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 MEOX2P50222 304 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 UCP2P55851 309 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 TRA2AQ13595 282 aaKnown RBP eCLIP9.89□□□□□ -0.83
PTPN20-204ENST00000374346 ZFP82Q8N141 532 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 NAXEQ8NCW5 288 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 AKR7LQ8NHP1 331 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 PIGCQ92535 297 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 ALKBH3Q96Q83 286 aaPredicted RBP9.89□□□□□ -0.83
PTPN20-204ENST00000374346 RSRP1Q9BUV0 290 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 EGLN1Q9GZT9 426 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 PARP12Q9H0J9 701 aaKnown RBP9.89□□□□□ -0.83
PTPN20-204ENST00000374346 SMDT1Q9H4I9 107 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 KCNJ16Q9NPI9 418 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 PARPBPQ9NWS1 579 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 COA4Q9NYJ1 87 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 hCG_38984A0A1B0GV85 526 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 C9JQL5 133 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 RBM11P57052 281 aaKnown RBP9.89□□□□□ -0.83
PTPN20-204ENST00000374346 PSG4Q00888 419 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 RSPO4Q2I0M5 234 aaPredicted RBP9.89□□□□□ -0.83
PTPN20-204ENST00000374346 KRTAP27-1Q3LI81 207 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 TSPO2Q5TGU0 170 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 ZNF561Q8N587 486 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 OR52M1Q8NGK5 317 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 SLC39A7Q92504 469 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 OR2H1Q9GZK4 316 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 ESRP2Q9H6T0 727 aaKnown RBP9.89□□□□□ -0.83
PTPN20-204ENST00000374346 PLSCR2Q9NRY7 297 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 PLA2G2EQ9NZK7 142 aa9.89□□□□□ -0.83
PTPN20-204ENST00000374346 PRUNE2Q8WUY3 3088 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 C3orf85A0A1B0GTC6 90 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 FAM221AA4D161 298 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 CCDC85CA6NKD9 419 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 MSTNO14793 375 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 OR7C1O76099 320 aaPredicted RBP9.88□□□□□ -0.83
PTPN20-204ENST00000374346 PPYP01298 95 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 IGHEP01854 428 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 S100A9P06702 114 aaKnown RBP9.88□□□□□ -0.83
PTPN20-204ENST00000374346 RHEBQ15382 184 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 AWAT1Q58HT5 328 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 BRICD5Q6PL45 260 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 WDR5BQ86VZ2 330 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 OR1J1Q8NGS3 322 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 DYRK2Q92630 601 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 MARS2Q96GW9 593 aaKnown RBP9.88□□□□□ -0.83
PTPN20-204ENST00000374346 CLCC1Q96S66 551 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 IFT22Q9H7X7 185 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 RCL1Q9Y2P8 373 aaKnown RBP9.88□□□□□ -0.83
PTPN20-204ENST00000374346 IGKV1-12A0A0C4DH73 117 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 FAM90A10PA6NDY2 464 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 FAM90A18PA6NE21 464 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 FAM90A16PA6NEW6 464 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 FAM90A20PA6NIJ5 464 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 FAM90A8PA6NJQ4 464 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 FAM90A7PA6NKC0 464 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 FAM90A22PA8MWA6 464 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 FAM90A12PA8MX19 464 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 FAM90A5PA8MXJ8 464 aa9.88□□□□□ -0.83
PTPN20-204ENST00000374346 FAM90A23PA8MXZ1 464 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms