RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 UCP2P55851 309 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 PPP1CBP62140 327 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 C1orf185Q5T7R7 199 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 C17orf107Q6ZR85 190 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 ZNF573Q86YE8 665 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 GCNT2Q8N0V5 402 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 MARCH1Q8TCQ1 289 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 SCGB3A2Q96PL1 93 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 HDHD3Q9BSH5 251 aaPredicted RBP10.72□□□□□ -0.69
PRPF4-202ENST00000374199 FXYD6Q9H0Q3 95 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 MSRB2Q9Y3D2 182 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 ZNF732B4DXR9 585 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 CTSDP07339 412 aaPredicted RBP10.72□□□□□ -0.69
PRPF4-202ENST00000374199 S100A1P23297 94 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 PAX5Q02548 391 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 THOC7Q6I9Y2 204 aaKnown RBP10.72□□□□□ -0.69
PRPF4-202ENST00000374199 Q6P435 159 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 JKAMPQ9P055 326 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 HSPB11Q9Y547 144 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 MUC6Q6W4X9 2439 aa10.72□□□□□ -0.69
PRPF4-202ENST00000374199 TMEM210A6NLX4 147 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 J3QT63 122 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 GOSR2O14653 212 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 HLA-AP01891 365 aaKnown RBP10.71□□□□□ -0.69
PRPF4-202ENST00000374199 ZNF345Q14585 488 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 SCGB2B2Q4G0G5 96 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 C4orf46Q504U0 113 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 SFXN3Q9BWM7 321 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 PPA2Q9H2U2 334 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 C12orf4Q9NQ89 552 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 OR5H1A6NKK0 313 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 NPIPB11E5RHQ5 1161 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 LYZL6O75951 148 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 BEND4Q6ZU67 534 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 CXorf67Q86X51 503 aaPredicted RBP10.71□□□□□ -0.69
PRPF4-202ENST00000374199 SPACA3Q8IXA5 215 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 LRTM2Q8N967 370 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 OR5M9Q8NGP3 310 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 NMES1Q9C002 83 aa10.71□□□□□ -0.69
PRPF4-202ENST00000374199 ANKRD30BLA7E2S9 258 aa10.71□□□□□ -0.7
PRPF4-202ENST00000374199 DIRAS3O95661 229 aa10.71□□□□□ -0.7
PRPF4-202ENST00000374199 HAAOP46952 286 aa10.71□□□□□ -0.7
PRPF4-202ENST00000374199 SEC61A1P61619 476 aaKnown RBP10.71□□□□□ -0.7
PRPF4-202ENST00000374199 MRPL49Q13405 166 aaKnown RBP10.71□□□□□ -0.7
PRPF4-202ENST00000374199 ARFRP1Q13795 201 aa10.71□□□□□ -0.7
PRPF4-202ENST00000374199 ZNF146Q15072 292 aa10.71□□□□□ -0.7
PRPF4-202ENST00000374199 TMEM17Q86X19 198 aa10.71□□□□□ -0.7
PRPF4-202ENST00000374199 LDLRAD3Q86YD5 345 aa10.71□□□□□ -0.7
PRPF4-202ENST00000374199 C11orf53Q8IXP5 236 aa10.71□□□□□ -0.7
PRPF4-202ENST00000374199 NRIP2Q9BQI9 281 aa10.71□□□□□ -0.7
PRPF4-202ENST00000374199 Q9N2K0 584 aa10.71□□□□□ -0.7
PRPF4-202ENST00000374199 RAB18Q9NP72 206 aa10.71□□□□□ -0.7
PRPF4-202ENST00000374199 IGHV1-18A0A0C4DH31 117 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 CRYM-AS1A6NIL9 109 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 ZNHIT1O43257 154 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 IFNA6P05013 189 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 PGA5P0DJD9 388 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 PSG7Q13046 419 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 ZNF474Q6S9Z5 364 aaPredicted RBP10.7□□□□□ -0.7
PRPF4-202ENST00000374199 ZNF610Q8N9Z0 462 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 LILRB4Q8NHJ6 448 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 SLAMF9Q96A28 289 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 MOB3AQ96BX8 217 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 GALNT14Q96FL9 552 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 NECAP2Q9NVZ3 263 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 SYNGR1O43759 233 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 TUSC2O75896 110 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 SLC22A5O76082 557 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 NFYAP23511 347 aaPredicted RBP10.7□□□□□ -0.7
PRPF4-202ENST00000374199 CD34P28906 385 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 UBE2NP61088 152 aaKnown RBP10.7□□□□□ -0.7
PRPF4-202ENST00000374199 Q8IYB0 196 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 PHB2Q99623 299 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 RSRP1Q9BUV0 290 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 ST6GALNAC5Q9BVH7 336 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 PROCRQ9UNN8 238 aa10.7□□□□□ -0.7
PRPF4-202ENST00000374199 CHD3Q12873 2000 aaKnown RBP10.7□□□□□ -0.7
PRPF4-202ENST00000374199 CECR9P0C854 216 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 TBR1Q16650 682 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 CLEC18BQ6UXF7 455 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 CMSS1Q9BQ75 279 aaKnown RBP10.69□□□□□ -0.7
PRPF4-202ENST00000374199 EHFQ9NZC4 300 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 GVINP1Q7Z2Y8 2422 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 TRAV24A0A0B4J272 114 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 IGHV2OR16-5A0A0B4J2B6 119 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 TUBAL3A6NHL2 446 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 TIMM23BQ5SRD1 257 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 BHLHA15Q7RTS1 189 aaPredicted RBP10.69□□□□□ -0.7
PRPF4-202ENST00000374199 KLF14Q8TD94 323 aaPredicted RBP10.69□□□□□ -0.7
PRPF4-202ENST00000374199 CABLES2Q9BTV7 478 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 OR2J1Q9GZK6 312 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 RIMS4Q9H426 269 aaPredicted RBP10.69□□□□□ -0.7
PRPF4-202ENST00000374199 SPACA1Q9HBV2 294 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 EP300Q09472 2414 aaPredicted RBP10.69□□□□□ -0.7
PRPF4-202ENST00000374199 RPS10-NUDT3A0A1W2PQS6 291 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 CCNOP22674 350 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 LMO1P25800 156 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 IL13RA1P78552 427 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 FGL1Q08830 312 aa10.69□□□□□ -0.7
PRPF4-202ENST00000374199 CHRFAM7AQ494W8 412 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms