RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 SNRPD2P62316 118 aaKnown RBP7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 MSMO1Q15800 293 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 ABCA11PQ4W5N1 156 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 SFRP5Q5T4F7 317 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 ZNF660Q6AZW8 331 aaPredicted RBP7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 THOC7Q6I9Y2 204 aaKnown RBP7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 PRSS54Q6PEW0 395 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 CLEC18BQ6UXF7 455 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 BEND4Q6ZU67 534 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 C1QL2Q7Z5L3 287 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 FBXL14Q8N1E6 418 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 DEFB124Q8NES8 71 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 OR10AD1Q8NGE0 317 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 OR52B4Q8NGK2 314 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 OR2AE1Q8NHA4 323 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 PRR7Q8TB68 274 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 PPP1R1CQ8WVI7 109 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 SLAMF9Q96A28 289 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 MOB3AQ96BX8 217 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 AQP10Q96PS8 301 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 SPACA5Q96QH8 159 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 SPIN2AQ99865 258 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 SPIN2BQ9BPZ2 258 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 RTBDNQ9BSG5 229 aaPredicted RBP7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 SOX7Q9BT81 388 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 FXYD6Q9H0Q3 95 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 ZNF442Q9H7R0 627 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 CDH20Q9HBT6 801 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 ZNF701Q9NV72 531 aaPredicted RBP7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 MYEF2Q9P2K5 600 aaKnown RBP7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 STARD10Q9Y365 291 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 EYSQ5T1H1 3165 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 PRUNE2Q8WUY3 3088 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 NCOR1O75376 2440 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 NCOA6Q14686 2063 aaPredicted RBP7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 IGKV1-27A0A075B6S5 117 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 C5orf51A6NDU8 294 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 IQCF6A8MYZ5 107 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 TEX46H3BTG2 121 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 J3QT63 122 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 SHOXO15266 292 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 TSC22D2O75157 780 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 CDS2O95674 445 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 IL18BPO95998 194 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 NAPSAO96009 420 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 IGKV3-15P01624 115 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 CELA3AP09093 270 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 TPT1P13693 172 aaKnown RBP7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 PGAM2P15259 253 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 ZNF14P17017 642 aaPredicted RBP7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 CXCL2P19875 107 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 IL32P24001 234 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 HERV-K104P61576 105 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 SORDQ00796 357 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 HGFACQ04756 655 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 TAF9Q16594 264 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 PAN3Q58A45 887 aaKnown RBP7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 GPR157Q5UAW9 335 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 UQCC3Q6UW78 93 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 SLC25A26Q70HW3 274 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 C6orf201Q7Z4U5 140 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 HSD17B13Q7Z5P4 300 aaPredicted RBP7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 FAM90A1Q86YD7 464 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 CMTM1Q8IZ96 169 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 LGI3Q8N145 548 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 FAM71E2Q8N5Q1 922 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 OR56B2PQ8NGI1 322 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 OR4A4PQ8NGN8 299 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 OR13G1Q8NGZ3 307 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 MRGPRFQ96AM1 343 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 AKR1E2Q96JD6 320 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 ZNF75AQ96N20 296 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 ARPC5LQ9BPX5 153 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 ZNF2Q9BSG1 426 aaPredicted RBP7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 RSRP1Q9BUV0 290 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 METTL8Q9H825 291 aaKnown RBP7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 ZFAND3Q9H8U3 227 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 RAB9BQ9NP90 201 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 RASL12Q9NYN1 266 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 CACFD1Q9UGQ2 172 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 AK3Q9UIJ7 227 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 TUBD1Q9UJT1 453 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 SPEF1Q9Y4P9 236 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 ATP23Q9Y6H3 246 aa7.5□□□□□ -1.21
SNRNP40-202ENST00000373720 BDP1A6H8Y1 2624 aa7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 A0A1B0GWJ7 208 aa7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 MBD3L4A6NDZ8 208 aaPredicted RBP7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 MBD3L3A6NE82 208 aaPredicted RBP7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 MBD3L5A6NJ08 208 aaPredicted RBP7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 ZNF732B4DXR9 585 aa7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 TRDCB7Z8K6 153 aa7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 PROB1E7EW31 1015 aa7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 F8VVB4 439 aa7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 F8VWA3 439 aa7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 TM4SF5O14894 197 aa7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 DEGS1O15121 323 aa7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 OR7C1O76099 320 aaPredicted RBP7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 SCAF4O95104 1147 aaKnown RBP7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 LY86O95711 162 aa7.49□□□□□ -1.21
SNRNP40-202ENST00000373720 HLA-HP01893 362 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms