RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ZNF664Q8N3J9 261 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 LRRC18Q8N456 261 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 OR5D14Q8NGL3 314 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 OR2AE1Q8NHA4 323 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF296Q8WUU4 475 aaPredicted RBP4.73□□□□□ -1.65
ATG4A-204ENST00000372246 ASB13Q8WXK3 278 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 CPNE4Q96A23 557 aaPredicted RBP4.73□□□□□ -1.65
ATG4A-204ENST00000372246 LYZL4Q96KX0 146 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 PECRQ9BY49 303 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 VSIRQ9H7M9 311 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 FAM212BQ9NTI7 297 aaPredicted RBP4.73□□□□□ -1.65
ATG4A-204ENST00000372246 NPIPA1Q9UND3 350 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 SLC7A11Q9UPY5 501 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 LHFPL6Q9Y693 200 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 MUC22E2RYF6 1773 aaPredicted RBP4.73□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF407Q9C0G0 2248 aa4.73□□□□□ -1.65
ATG4A-204ENST00000372246 DIDO1Q9BTC0 2240 aaKnown RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 IGHV3-15A0A0B4J1V0 119 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 IGSF23A1L1A6 192 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 ZFP92A6NM28 416 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 HSPB6O14558 160 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 PPP1R2P9O14990 202 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 JTBO76095 146 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 TMEM50AO95807 157 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 IL18BPO95998 194 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 OR4A8P0C604 315 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 PATE4P0C8F1 98 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 FCGR2AP12318 317 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 GP1BBP13224 206 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 ATP6V0CP27449 155 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 HSD11B1P28845 292 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 KIR2DL1P43626 348 aaPredicted RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 SLC26A5P58743 744 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 TAS2R31P59538 309 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 RTP5Q14D33 572 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 P2RY6Q15077 328 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 UBE2V2Q15819 145 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 MPV17LQ2QL34 196 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 CXorf66Q5JRM2 361 aaPredicted RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF776Q68DI1 518 aaPredicted RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 FAHD2BQ6P2I3 314 aaPredicted RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 SSX7Q7RTT5 188 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 PEG10Q86TG7 708 aaKnown RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF429Q86V71 674 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 OR5T1Q8NG75 326 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 OR56B2PQ8NGI1 322 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 OR2G3Q8NGZ4 309 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 LYPD6BQ8NI32 183 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 LIPHQ8WWY8 451 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 RLN3Q8WXF3 142 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 FAHD2AQ96GK7 314 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 PACRGQ96M98 296 aaPredicted RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 TP53RKQ96S44 253 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 SPENQ96T58 3664 aaKnown RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 HIST1H2BLQ99880 126 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 TCEAL7Q9BRU2 100 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 AURKAIP1Q9NWT8 199 aaPredicted RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 KLHL13Q9P2N7 655 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 FOXD3Q9UJU5 478 aaPredicted RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 SRPK3Q9UPE1 567 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 URB1O60287 2271 aaKnown RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 C2orf16Q68DN1 1984 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 MEGF11A6BM72 1044 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 NKX2-6A6NCS4 301 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 OR5H15A6NDH6 313 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 RBFOX3A6NFN3 312 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF850A8MQ14 1090 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 SEC14L6B5MCN3 397 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 TCAPO15273 167 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 PHF1O43189 567 aaPredicted RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 NUDT21O43809 227 aaKnown RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 SSSCA1O60232 199 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 CRYABP02511 175 aaKnown RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 OR5H8P0DN80 308 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 HOXB2P14652 356 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 LMO1P25800 156 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 CHATP28329 748 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 SFTPDP35247 375 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 RPS16P62249 146 aaKnown RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 RAB11AP62491 216 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 NKX6-1P78426 367 aaPredicted RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 TLE3Q04726 772 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 PLCXD2Q0VAA5 305 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 ZNF154Q13106 437 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 KISS1Q15726 138 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 IGFBP7Q16270 282 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 PIGYQ3MUY2 71 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 EMC4Q5J8M3 183 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 KLHL24Q6TFL4 600 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 TMPRSS7Q7RTY8 843 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 CALHM1Q8IU99 346 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 RNF133Q8WVZ7 376 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 GALNT14Q96FL9 552 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 OR10A2Q9H208 303 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 CALHM2Q9HA72 323 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 LMAN1LQ9HAT1 526 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 GPR173Q9NS66 373 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 CBLN4Q9NTU7 201 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 GNG13Q9P2W3 67 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms