RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 MRPL2Q5T653 305 aaKnown RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 C22orf42Q6IC83 251 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 GUSBP11Q6P575 273 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 ATRAIDQ6UW56 229 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 DTX2Q86UW9 622 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 TGIF2LXQ8IUE1 241 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 TMEFF1Q8IYR6 380 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 BEST3Q8N1M1 668 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 ZNF561Q8N587 486 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 ZNF614Q8N883 585 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 OR2M3Q8NG83 312 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 OR5D16Q8NGK9 328 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 OR4X1Q8NH49 305 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 MFSD8Q8NHS3 518 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 PLPPR1Q8TBJ4 325 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 Q96MF0 132 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 ADOQ96SZ5 270 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 SLC6A7Q99884 636 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 APOL4Q9BPW4 351 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 AMBNQ9NP70 447 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 PRTFDC1Q9NRG1 225 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 UBQLN4Q9NRR5 601 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 SDHAF2Q9NX18 166 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 Q9UFV3 132 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 SIGLEC9Q9Y336 463 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 FAM96BQ9Y3D0 163 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 CUL9Q8IWT3 2517 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 RDH16O75452 317 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 FARS2O95363 451 aaKnown RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 CYB5R3P00387 301 aaPredicted RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 IFNA16P05015 189 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 NPSP0C0P6 89 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 PCSK6P29122 969 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 HOXD3P31249 432 aaPredicted RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 P2RX1P51575 399 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 TMPRSS3P57727 454 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 CD226Q15762 336 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 GPR135Q8IZ08 494 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 KIR3DL3Q8N743 410 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 OR10K1Q8NGX5 313 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 OR5W2Q8NH69 310 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 LYPD6BQ8NI32 183 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 LMX1AQ8TE12 382 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 DEDD2Q8WXF8 326 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 ZBTB8AQ96BR9 441 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 SMIM19Q96E16 107 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 YIPF3Q9GZM5 350 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 KRCC1Q9NPI7 259 aaPredicted RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 PNRC2Q9NPJ4 139 aaKnown RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 HINT3Q9NQE9 182 aaKnown RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 MIEF1Q9NQG6 463 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 ZNF107Q9UII5 783 aaPredicted RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 ELF5Q9UKW6 265 aaPredicted RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 KCNS2Q9ULS6 477 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 A0A1B0GTH9 108 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 J3QR06 171 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 SAP18O00422 153 aaKnown RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 OIP5O43482 229 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 RGS10O43665 173 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 HPGDSO60760 199 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 IFNA21P01568 189 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 PVRP15151 417 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 SPI1P17947 270 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 ZNF117Q03924 483 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 TRAM1Q15629 374 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 KCNJ8Q15842 424 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 TCTEX1D4Q5JR98 221 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 OR6V1Q8N148 313 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 WDSUB1Q8N9V3 476 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 OR4K5Q8NGD3 323 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 OR10Q1Q8NGQ4 319 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 RASL10AQ92737 203 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 BPIFA2Q96DR5 249 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 THAP7Q9BT49 309 aaPredicted RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 ALOXE3Q9BYJ1 711 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 PLGRKTQ9HBL7 147 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 ABCB9Q9NP78 766 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 TECRQ9NZ01 308 aaKnown RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 RSL24D1Q9UHA3 163 aaKnown RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 TP53TG1Q9Y2A0 90 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 GOLT1BQ9Y3E0 138 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 PI4KAP42356 2102 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 LOC110117498-PIK3R3F6TDL0 507 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 TRMUO75648 421 aaKnown RBP3.29□□□□□ -1.88
MCF2-203ENST00000370576 NUDT14O95848 222 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 KNG1P01042 644 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 ADH4P08319 380 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 PSMA1P25786 263 aaKnown RBP3.29□□□□□ -1.88
MCF2-203ENST00000370576 VSX2P58304 361 aaPredicted RBP3.29□□□□□ -1.88
MCF2-203ENST00000370576 BTG2P78543 158 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 DCDP81605 110 aaKnown RBP3.29□□□□□ -1.88
MCF2-203ENST00000370576 ELOA3BQ3SY89 546 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 TIMM50Q3ZCQ8 353 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 SLC22A6Q4U2R8 563 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 ZNF324BQ6AW86 544 aaPredicted RBP3.29□□□□□ -1.88
MCF2-203ENST00000370576 ASCL5Q7RTU5 278 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 SATL1Q86VE3 508 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 ANGPTL5Q86XS5 388 aa3.29□□□□□ -1.88
MCF2-203ENST00000370576 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms