RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 C9orf50Q5SZB4 431 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 GPR173Q9NS66 373 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 ANXA10Q9UJ72 324 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 KCNIP3Q9Y2W7 256 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 CELSR3Q9NYQ7 3312 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 TMEM131Q92545 1883 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 THADAQ6YHU6 1953 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 NCOA6Q14686 2063 aaPredicted RBP10.73□□□□□ -0.69
PHGDH-201ENST00000369407 OR5H15A6NDH6 313 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 LIPT2A6NK58 231 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 K7N7A8 449 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 PHF1O43189 567 aaPredicted RBP10.73□□□□□ -0.69
PHGDH-201ENST00000369407 CST7O76096 145 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 MMP7P09237 267 aaPredicted RBP10.73□□□□□ -0.69
PHGDH-201ENST00000369407 GABRG2P18507 467 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 ZNF429Q86V71 674 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 UEVLDQ8IX04 471 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 ZNF784Q8NCA9 323 aaPredicted RBP10.73□□□□□ -0.69
PHGDH-201ENST00000369407 OR1N1Q8NGS0 311 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 LMX1AQ8TE12 382 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 TMEM234Q8WY98 164 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 CRISPLD2Q9H0B8 497 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 PNRC2Q9NPJ4 139 aaKnown RBP10.73□□□□□ -0.69
PHGDH-201ENST00000369407 AK3Q9UIJ7 227 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 PIGLQ9Y2B2 252 aa10.73□□□□□ -0.69
PHGDH-201ENST00000369407 FAM230AA0A1W2PPH8 454 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 FOXI3A8MTJ6 420 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-201ENST00000369407 RAB1AP62820 205 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 EWSR1Q01844 656 aaKnown RBP eCLIP10.72□□□□□ -0.69
PHGDH-201ENST00000369407 DEFB133Q30KQ1 61 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 OR2T2Q6IF00 324 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 COMMD1Q8N668 190 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 SLC38A9Q8NBW4 561 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 MRPL13Q9BYD1 178 aaKnown RBP10.72□□□□□ -0.69
PHGDH-201ENST00000369407 NAA60Q9H7X0 242 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 SLC7A11Q9UPY5 501 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 A0A087WZY1 265 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 VSTM2BA6NLU5 285 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 HSD17B6O14756 317 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 ZNF43P17038 809 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 GALNSP34059 522 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 APLNRP35414 380 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 PKIAP61925 76 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 NKX6-1P78426 367 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-201ENST00000369407 TLE1Q04724 770 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 ZP4Q12836 540 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 DOK3Q7L591 496 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 C1QL4Q86Z23 238 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 KLHL13Q9P2N7 655 aa10.72□□□□□ -0.69
PHGDH-201ENST00000369407 ST8SIA3O43173 380 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 SPSB3Q6PJ21 355 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 FAM180AQ6UWF9 173 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 OR2AE1Q8NHA4 323 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 DDIT4LQ96D03 193 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 GALNT14Q96FL9 552 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 TPSD1Q9BZJ3 242 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 ZNF160Q9HCG1 818 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 SLC2A9Q9NRM0 540 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 IGSF23A1L1A6 192 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 ZNF724A8MTY0 619 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 SERPINE3A8MV23 424 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 PGA4P0DJD7 388 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 PGA3P0DJD8 388 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 PNLIPP16233 465 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 DCAF7P61962 342 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 TMEM123Q8N131 208 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 SLC35G3Q8N808 338 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 NOXO1Q8NFA2 376 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 FRZBQ92765 325 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 CFHR5Q9BXR6 569 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 BCO1Q9HAY6 547 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 KLRF1Q9NZS2 232 aa10.71□□□□□ -0.69
PHGDH-201ENST00000369407 NKX2-6A6NCS4 301 aa10.71□□□□□ -0.7
PHGDH-201ENST00000369407 IGHG1P01857 330 aa10.71□□□□□ -0.7
PHGDH-201ENST00000369407 NPSP0C0P6 89 aa10.71□□□□□ -0.7
PHGDH-201ENST00000369407 TRGC1P0CF51 173 aa10.71□□□□□ -0.7
PHGDH-201ENST00000369407 FBLP22087 321 aaKnown RBP10.71□□□□□ -0.7
PHGDH-201ENST00000369407 ARL4DP49703 201 aa10.71□□□□□ -0.7
PHGDH-201ENST00000369407 NUTF2P61970 127 aaKnown RBP10.71□□□□□ -0.7
PHGDH-201ENST00000369407 TNFRSF9Q07011 255 aa10.71□□□□□ -0.7
PHGDH-201ENST00000369407 COTL1Q14019 142 aa10.71□□□□□ -0.7
PHGDH-201ENST00000369407 THEM4Q5T1C6 240 aa10.71□□□□□ -0.7
PHGDH-201ENST00000369407 SLC22A25Q6T423 547 aa10.71□□□□□ -0.7
PHGDH-201ENST00000369407 CARFQ8N187 725 aa10.71□□□□□ -0.7
PHGDH-201ENST00000369407 HIST3H2BBQ8N257 126 aa10.71□□□□□ -0.7
PHGDH-201ENST00000369407 OR1L3Q8NH93 324 aa10.71□□□□□ -0.7
PHGDH-201ENST00000369407 SSC4DQ8WTU2 575 aa10.71□□□□□ -0.7
PHGDH-201ENST00000369407 TMEM171Q8WVE6 324 aa10.71□□□□□ -0.7
PHGDH-201ENST00000369407 STRAPQ9Y3F4 350 aaKnown RBP10.71□□□□□ -0.7
PHGDH-201ENST00000369407 ZNF587BE7ETH6 402 aa10.7□□□□□ -0.7
PHGDH-201ENST00000369407 SSSCA1O60232 199 aa10.7□□□□□ -0.7
PHGDH-201ENST00000369407 SCAF4O95104 1147 aaKnown RBP10.7□□□□□ -0.7
PHGDH-201ENST00000369407 IFNA10P01566 189 aa10.7□□□□□ -0.7
PHGDH-201ENST00000369407 SRP19P09132 144 aaKnown RBP10.7□□□□□ -0.7
PHGDH-201ENST00000369407 EPHA1P21709 976 aa10.7□□□□□ -0.7
PHGDH-201ENST00000369407 S100A7P31151 101 aa10.7□□□□□ -0.7
PHGDH-201ENST00000369407 MTCP1P56278 107 aa10.7□□□□□ -0.7
PHGDH-201ENST00000369407 ABHD5Q8WTS1 349 aa10.7□□□□□ -0.7
PHGDH-201ENST00000369407 TP53RKQ96S44 253 aa10.7□□□□□ -0.7
PHGDH-201ENST00000369407 FREM2Q5SZK8 3169 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms