RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 VSIG8P0DPA2 414 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 FOLR2P14207 255 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 PVALBP20472 110 aaPredicted RBP10.35□□□□□ -0.75
USF1-203ENST00000368021 COL8A1P27658 744 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 SLC6A1P30531 599 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 PTGFRP43088 359 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 RAD52P43351 418 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 OR3A4PP47883 348 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 RBP2P50120 134 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 FUT6P51993 359 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 EFNB2P52799 333 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 PRSS12P56730 875 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 SPCS3P61009 180 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 FAM27E3Q08E93 113 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 PLA2G7Q13093 441 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 HFEQ30201 348 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 HIST2H2BCQ6DN03 193 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 SEZ6L2Q6UXD5 910 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 CA5BP1Q8WTZ4 195 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 GTF3AQ92664 365 aaKnown RBP10.35□□□□□ -0.75
USF1-203ENST00000368021 NARS2Q96I59 477 aaKnown RBP10.35□□□□□ -0.75
USF1-203ENST00000368021 C1orf147Q96MC9 270 aaPredicted RBP10.35□□□□□ -0.75
USF1-203ENST00000368021 OCSTAMPQ9BR26 566 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 C1QTNF6Q9BXI9 259 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 BCL2L14Q9BZR8 327 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 DPAGT1Q9H3H5 408 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 MRPS28Q9Y2Q9 187 aaKnown RBP10.35□□□□□ -0.75
USF1-203ENST00000368021 HEATR1Q9H583 2144 aaKnown RBP10.35□□□□□ -0.75
USF1-203ENST00000368021 IGHV2OR16-5A0A0B4J2B6 119 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 TMEM14DPA8MWL7 114 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 C16orf97H3BN30 126 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 SCGNO76038 276 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 RAC2P15153 192 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 CCKARP32238 428 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 PTH2RP49190 550 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 MTCP1P56278 107 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 MRPS10P82664 201 aaKnown RBP10.35□□□□□ -0.75
USF1-203ENST00000368021 MADCAM1Q13477 382 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 OPCMLQ14982 345 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 FAM189A2Q15884 450 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 AVPI1Q5T686 147 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 PLCXD3Q63HM9 321 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 RAB12Q6IQ22 244 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 GLIPR1L1Q6UWM5 242 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 BTN2A1Q7KYR7 527 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 RNF144BQ7Z419 303 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 KCNG3Q8TAE7 436 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 NPRL2Q8WTW4 380 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 PIGCQ92535 297 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 BORCS8Q96FH0 119 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 PAPOLGQ9BWT3 736 aaKnown RBP10.35□□□□□ -0.75
USF1-203ENST00000368021 KCNK15Q9H427 330 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 ZNF222Q9UK12 451 aa10.35□□□□□ -0.75
USF1-203ENST00000368021 METTL21EPA6NDL7 271 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 GSTZ1O43708 216 aaPredicted RBP10.34□□□□□ -0.75
USF1-203ENST00000368021 RP2O75695 350 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 IGHV2-70P01814 119 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 SELEP16581 610 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 ZP1P60852 638 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 DEFA6Q01524 100 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 NAAAQ02083 359 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 UNC119Q13432 240 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 ZDHHC23Q8IYP9 409 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 ZNF808Q8N4W9 903 aaPredicted RBP10.34□□□□□ -0.75
USF1-203ENST00000368021 SMIM4Q8WVI0 70 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 UPRTQ96BW1 309 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 NUDT16L1Q9BRJ7 211 aaKnown RBP10.34□□□□□ -0.75
USF1-203ENST00000368021 OR2J1Q9GZK6 312 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 CST11Q9H112 138 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 ATG5Q9H1Y0 275 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 OR51B6Q9H340 312 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 OR51J1Q9H342 316 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 MRPL15Q9P015 296 aaKnown RBP10.34□□□□□ -0.75
USF1-203ENST00000368021 NLKQ9UBE8 527 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 PLEKHA6Q9Y2H5 1048 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 MPC1Q9Y5U8 109 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 CADP27708 2225 aa10.34□□□□□ -0.75
USF1-203ENST00000368021 NKX2-6A6NCS4 301 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 FAM90A27PA6NNH2 459 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 ANKRD30BLA7E2S9 258 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 ZNF850A8MQ14 1090 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 SULT1A3P0DMM9 295 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 SULT1A4P0DMN0 295 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 ATP1B3P54709 279 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 TAS2R20P59543 309 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 PRDX4Q13162 271 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 CEACAM21Q3KPI0 293 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 LGALSLQ3ZCW2 172 aaPredicted RBP10.33□□□□□ -0.76
USF1-203ENST00000368021 DMRTC1Q5HYR2 192 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 HAGHLQ6PII5 290 aaPredicted RBP10.33□□□□□ -0.76
USF1-203ENST00000368021 MOB3CQ70IA8 216 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 BIVMQ86UB2 503 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 OR1J1Q8NGS3 322 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 SLC25A40Q8TBP6 338 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 GLYATL2Q8WU03 294 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 TNFAIP8L1Q8WVP5 186 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 RFT1Q96AA3 541 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 CMBLQ96DG6 245 aa10.33□□□□□ -0.76
USF1-203ENST00000368021 MARS2Q96GW9 593 aaKnown RBP10.33□□□□□ -0.76
USF1-203ENST00000368021 THAP7Q9BT49 309 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms