RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 RBM39Q14498 530 aaKnown RBP10.03□□□□□ -0.8
USF1-201ENST00000368019 GPR157Q5UAW9 335 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 SP5Q6BEB4 398 aaPredicted RBP10.03□□□□□ -0.8
USF1-201ENST00000368019 RPL7L1Q6DKI1 246 aaKnown RBP10.03□□□□□ -0.8
USF1-201ENST00000368019 POMZP3Q6PJE2 187 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 DHRS11Q6UWP2 260 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 Q6ZRG5 221 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 LINC00696Q6ZRV3 163 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 TMPPEQ6ZT21 453 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 SGPP2Q8IWX5 399 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 METTL27Q8N6F8 245 aaPredicted RBP10.03□□□□□ -0.8
USF1-201ENST00000368019 BOLLQ8N9W6 283 aaKnown RBP10.03□□□□□ -0.8
USF1-201ENST00000368019 OR9K2Q8NGE7 335 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 OR14K1Q8NGZ2 314 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 GALNT14Q96FL9 552 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 TAAR6Q96RI8 345 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 GINS3Q9BRX5 216 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 CRB3Q9BUF7 120 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 OR51M1Q9H341 326 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 SERINC1Q9NRX5 453 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 NSG2Q9Y328 171 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 LHFPL6Q9Y693 200 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 FREM3P0C091 2139 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 ADGRG4Q8IZF6 3080 aa10.03□□□□□ -0.8
USF1-201ENST00000368019 CACNA1CQ13936 2221 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 IGKV1D-43A0A0B4J1Z2 117 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 A0A0U1RQV5 110 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 CRYM-AS1A6NIL9 109 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 ZNF354AO60765 605 aaPredicted RBP10.02□□□□□ -0.81
USF1-201ENST00000368019 RAD51DO75771 328 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 IGHV2-5P01817 119 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 IGHG1P01857 330 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 S100A6P06703 90 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 HCKP08631 526 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 DANCRP0C864 163 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 PGA4P0DJD7 388 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 PGA3P0DJD8 388 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 COX6A1P12074 109 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 NME2P22392 152 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 FCGR2CP31995 323 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 CD80P33681 288 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 PTGER4P35408 488 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 SNCAP37840 140 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 TNFSF10P50591 281 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 SNU13P55769 128 aaKnown RBP10.02□□□□□ -0.81
USF1-201ENST00000368019 BIDP55957 195 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 LSM6P62312 80 aaKnown RBP10.02□□□□□ -0.81
USF1-201ENST00000368019 CSNK2A1P68400 391 aaPredicted RBP10.02□□□□□ -0.81
USF1-201ENST00000368019 HGFACQ04756 655 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 IL13RA2Q14627 380 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 OTPQ5XKR4 325 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 FAM180AQ6UWF9 173 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 UEVLDQ8IX04 471 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 TMEM104Q8NE00 496 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 CSNK2A3Q8NEV1 391 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 OR8B12Q8NGG6 310 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 OR51F2Q8NH61 342 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 OR6X1Q8NH79 312 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 TCTEX1D2Q8WW35 142 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 PP6455Q8WZ26 134 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 HAS2Q92819 552 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 C14orf79Q96F83 325 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 CPNE2Q96FN4 548 aaPredicted RBP10.02□□□□□ -0.81
USF1-201ENST00000368019 POM121Q96HA1 1249 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 ARHGAP5-AS1Q96IT6 56 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 PBDC1Q9BVG4 233 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 SCRT1Q9BWW7 348 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 SUCNR1Q9BXA5 334 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 PECRQ9BY49 303 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 TMEM231Q9H6L2 316 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 ZNF160Q9HCG1 818 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 PNRC2Q9NPJ4 139 aaKnown RBP10.02□□□□□ -0.81
USF1-201ENST00000368019 OR2S2Q9NQN1 319 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 EHFQ9NZC4 300 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 B3GAT1Q9P2W7 334 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 FBXL17Q9UF56 701 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 AMDHD2Q9Y303 409 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 FAM96BQ9Y3D0 163 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 V9GYS6 101 aa10.02□□□□□ -0.81
USF1-201ENST00000368019 F8P00451 2351 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 LOC102723996A0A087X1L8 192 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 DHRS7CA6NNS2 312 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 GPR137BO60478 399 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 SERPINA7P05543 415 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 DTYMKP23919 212 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 NFYBP25208 207 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 OR3A4PP47883 348 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 P2RY1P47900 373 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 ZNF121P58317 390 aaPredicted RBP10.01□□□□□ -0.81
USF1-201ENST00000368019 HIST3H3Q16695 136 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 IAH1Q2TAA2 248 aaPredicted RBP10.01□□□□□ -0.81
USF1-201ENST00000368019 CHRFAM7AQ494W8 412 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 FOXL2NBQ6ZUU3 175 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 PRSS58Q8IYP2 241 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 LRRC18Q8N456 261 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 OR1J1Q8NGS3 322 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 OR51E1Q8TCB6 317 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 ROBO4Q8WZ75 1007 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 ABHD14BQ96IU4 210 aa10.01□□□□□ -0.81
USF1-201ENST00000368019 TGIF2Q9GZN2 237 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms