RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 GSSP48637 474 aa11.32□□□□□ -0.6
VAMP4-202ENST00000367740 PSMA6P60900 246 aaKnown RBP11.32□□□□□ -0.6
VAMP4-202ENST00000367740 RUNX1Q01196 453 aa11.32□□□□□ -0.6
VAMP4-202ENST00000367740 CRMP1Q14194 572 aa11.32□□□□□ -0.6
VAMP4-202ENST00000367740 GRK1Q15835 563 aa11.32□□□□□ -0.6
VAMP4-202ENST00000367740 TRPM8Q7Z2W7 1104 aa11.32□□□□□ -0.6
VAMP4-202ENST00000367740 CATSPERDQ86XM0 798 aa11.32□□□□□ -0.6
VAMP4-202ENST00000367740 ERI1Q8IV48 349 aaKnown RBP11.32□□□□□ -0.6
VAMP4-202ENST00000367740 TOMM40LQ969M1 308 aa11.32□□□□□ -0.6
VAMP4-202ENST00000367740 INTS14Q96SY0 518 aa11.32□□□□□ -0.6
VAMP4-202ENST00000367740 FAM110AQ9BQ89 295 aa11.32□□□□□ -0.6
VAMP4-202ENST00000367740 DCAF13Q9NV06 445 aaKnown RBP11.32□□□□□ -0.6
VAMP4-202ENST00000367740 FAM32AQ9Y421 112 aaKnown RBP11.32□□□□□ -0.6
VAMP4-202ENST00000367740 PQLC2LA1A4F0 135 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 MAGEA13PA6NCF6 341 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 CXCR6O00574 342 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 TOR1AO14656 332 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 MRASO14807 208 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 NPPAP01160 153 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 IGKV1D-33P01593 117 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 IGKV1-33P01594 117 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 COQ5Q5HYK3 327 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 ZNF684Q5T5D7 378 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 FAM53AQ6NSI3 398 aaPredicted RBP11.31□□□□□ -0.6
VAMP4-202ENST00000367740 STON2Q8WXE9 905 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 DLX4Q92988 240 aaPredicted RBP11.31□□□□□ -0.6
VAMP4-202ENST00000367740 RPEQ96AT9 228 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 ABCG5Q9H222 651 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 GAL3ST2Q9H3Q3 398 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 PCDHB16Q9NRJ7 776 aa11.31□□□□□ -0.6
VAMP4-202ENST00000367740 PSPNO60542 156 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 NRASP01111 189 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 PEX2P28328 305 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 P2RX3P56373 397 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 MAGOHP61326 146 aaKnown RBP11.3□□□□□ -0.6
VAMP4-202ENST00000367740 RIPPLY1Q0D2K3 151 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 KIAA0141Q14154 515 aaPredicted RBP11.3□□□□□ -0.6
VAMP4-202ENST00000367740 DIAPH2-AS1Q14236 149 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 LCN1P1Q5VSP4 162 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 ACSM6Q6P461 480 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 HAPLN4Q86UW8 402 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.3□□□□□ -0.6
VAMP4-202ENST00000367740 OR52L1Q8NGH7 329 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 EME1Q96AY2 570 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 C7orf34Q96L11 122 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 UBE2E2Q96LR5 201 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 OR5B12Q96R08 314 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 LIN7CQ9NUP9 197 aaKnown RBP11.3□□□□□ -0.6
VAMP4-202ENST00000367740 IL36RNQ9UBH0 155 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 PIGLQ9Y2B2 252 aa11.3□□□□□ -0.6
VAMP4-202ENST00000367740 MUC4Q99102 2169 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 A0A087X0M5 115 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 A0A0U1RQV5 110 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 A0A1B0GX30 115 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 RRP9O43818 475 aaKnown RBP11.29□□□□□ -0.6
VAMP4-202ENST00000367740 GABRR1P24046 479 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 BLVRAP53004 296 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 PRRX1P54821 245 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 SLURP1P55000 103 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 IL24Q13007 206 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 ASRGL1Q7L266 308 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 ANGPTL5Q86XS5 388 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 TGIF2LXQ8IUE1 241 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 RNF148Q8N7C7 305 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 ZNF491Q8N8L2 437 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 OR8D4Q8NGM9 314 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 ARPC1AQ92747 370 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 HRASLS5Q96KN8 279 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 GPR173Q9NS66 373 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 CMTM6Q9NX76 183 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 DNAJB9Q9UBS3 223 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 ENPP5Q9UJA9 477 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 CDH10Q9Y6N8 788 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 U3KQV3 271 aa11.29□□□□□ -0.6
VAMP4-202ENST00000367740 HSPA12AO43301 675 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 HAND1O96004 215 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 IGLV3-1P01715 115 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 ATP6V1B1P15313 513 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 ERP29P30040 261 aaKnown RBP11.28□□□□□ -0.6
VAMP4-202ENST00000367740 OR3A1P47881 315 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 ISL1P61371 349 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 TSPAN31Q12999 210 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 RNLSQ5VYX0 342 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 TMEM42Q69YG0 159 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 WDR93Q6P2C0 686 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 SHFQ7M4L6 423 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 COMMD2Q86X83 199 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 Q8N9W7 124 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 ITFG2Q969R8 447 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 NABP2Q9BQ15 211 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 HSPB9Q9BQS6 159 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 PKIBQ9C010 78 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 KLK15Q9H2R5 256 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 HIPK2Q9H2X6 1198 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 GHITMQ9H3K2 345 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 GPR84Q9NQS5 396 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 MTCH1Q9NZJ7 389 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 SLC7A11Q9UPY5 501 aa11.28□□□□□ -0.6
VAMP4-202ENST00000367740 TRGV10A0A0A0MS01 117 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 BBIP1A8MTZ0 92 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms