RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 GLMPQ8WWB7 406 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 C1QTNF6Q9BXI9 259 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 GAB2Q9UQC2 676 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 OR2M5A3KFT3 312 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 NDUFS4O43181 175 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 CD22P20273 847 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 CSRP3P50461 194 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 RPS26P62854 115 aaKnown RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 PAX5Q02548 391 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 SLC25A48Q6ZT89 311 aaKnown RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 MED20Q9H944 212 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 RBFOX3A6NFN3 312 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF16P17020 682 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 KLF9Q13886 244 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 LAX1Q8IWV1 398 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 MMP17Q9ULZ9 603 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 SPATA46Q5T0L3 261 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 OTOSQ8NHW6 89 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 TMEM56Q96MV1 263 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 NDRG2Q9UN36 371 aaKnown RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 LILRA5A6NI73 299 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 PRRT4C9JH25 899 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 PYCR3Q53H96 274 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 C1orf194Q5T5A4 169 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 TMEM25Q86YD3 366 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 GATSQ8NAP1 163 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 C5orf30Q96GV9 206 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 HES4Q9HCC6 221 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 TRAV38-1A0A0B4J264 116 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 LGALS14Q8TCE9 139 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF442Q9H7R0 627 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 SRD5A3Q9H8P0 318 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 EIF4EBP3O60516 100 aaPredicted RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 B3GALT4O96024 378 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 IGHA2P01877 340 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 CGB2Q6NT52 195 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 TTC9BQ8N6N2 239 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 RND1Q92730 232 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 MS4A8Q9BY19 250 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 SEBOXQ9HB31 216 aaPredicted RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 CENPMQ9NSP4 180 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 SIGLEC7Q9Y286 467 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 AMDHD2Q9Y303 409 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 SOCS6O14544 535 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 CRXO43186 299 aaPredicted RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 ACVRL1P37023 503 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 CRYBB2P43320 205 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 SPEM1Q8N4L4 309 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 SCCPDHQ8NBX0 429 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 MUC7Q8TAX7 377 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF705GA8MUZ8 300 aaPredicted RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF705FA8MVS1 300 aaPredicted RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF705DP0CH99 300 aaPredicted RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 ELAVL1Q15717 326 aaKnown RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 TRNP1Q6NT89 227 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 ASCL3Q9NQ33 180 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 CNIH4Q9P003 139 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF732B4DXR9 585 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 CEACAM1P13688 526 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 RPL12P30050 165 aaKnown RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 TAL2Q16559 108 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 OR10X1Q8NGY0 326 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 FBXW2Q9UKT8 454 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 IQCF6A8MYZ5 107 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 F8W1H4 67 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 ASPHD2Q6ICH7 369 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 C22orf39Q6P5X5 142 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 RNF5Q99942 180 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 RNPS1Q15287 305 aaKnown RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 C1orf100Q5SVJ3 147 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 KLHDC7BQ96G42 594 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 C12orf76Q8N812 135 aaPredicted RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 OR2M3Q8NG83 312 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 OR4A5Q8NH83 315 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 HSD17B10Q99714 261 aaKnown RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 EGLN1Q9GZT9 426 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 MAP1LC3AQ9H492 121 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 TECRQ9NZ01 308 aaKnown RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 OR2W1Q9Y3N9 320 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 TWIST1Q15672 202 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 THOC3Q96J01 351 aaKnown RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 A0A1B0GVT2 93 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 MYBPHLA2RUH7 354 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 MFSD12Q6NUT3 480 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 FBXO46Q6PJ61 603 aaPredicted RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 OR1A1Q9P1Q5 309 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 MYO9BQ13459 2157 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 TRBV5-3A0A0A0MS03 114 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 FRG2CA6NGY1 282 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 C9JCJ5 164 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 RER1O15258 196 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 LANCL1O43813 399 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 MMDQ15546 238 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 CD226Q15762 336 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 CLDN19Q8N6F1 224 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 ANKUB1A6NFN9 424 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 OR1F1O43749 312 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 TNFSF11O14788 317 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 SCGB1C2P0DMR2 95 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF44P15621 663 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms