RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CNTD2Q9H8S5 307 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 CSNK1G1Q9HCP0 422 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 FAM183AA6NL82 134 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 CDRT15L2A8MXV6 281 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 B4GALT3O60512 393 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 SHC1P29353 583 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 OPRD1P41143 372 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 HTR6P50406 440 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 PPP1CBP62140 327 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 TMEM97Q5BJF2 176 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 C1orf220Q5T0J3 134 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 LCN15Q6UWW0 184 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 SLC25A42Q86VD7 318 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 VN1R17PQ8TDU5 208 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 KIRREL1Q96J84 757 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 SELENOIQ9C0D9 397 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 FOCADQ5VW36 1801 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 IGHV3-20A0A0C4DH32 117 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 H7C1C5 153 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 M0QYG6 137 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 RRASP10301 218 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 EXOSC7Q15024 291 aaKnown RBP7.71□□□□□ -1.17
SYNE1-206ENST00000367253 Q499Y3 187 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 CBLL1Q75N03 491 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 MRGPREQ86SM8 312 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 ZPLD1Q8TCW7 415 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 MRAPQ8TCY5 172 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 RXFP4Q8TDU9 374 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 APOBEC3DQ96AK3 386 aaPredicted RBP7.71□□□□□ -1.17
SYNE1-206ENST00000367253 MARCH4Q9P2E8 410 aaPredicted RBP7.71□□□□□ -1.17
SYNE1-206ENST00000367253 TRDV1A0A1B0GX56 115 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 TCRBV16S1A1N1A0A5B0 115 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 ERVH48-1M5A8F1 160 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 GYPBP06028 91 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 PSMB6P28072 239 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 OR3A4PP47883 348 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 MARCH8Q5T0T0 291 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 TRNP1Q6NT89 227 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 OR51F2Q8NH61 342 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 RNF133Q8WVZ7 376 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 FAM168AQ92567 244 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 GHSRQ92847 366 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 KHSRPQ92945 711 aaKnown RBP eCLIP7.71□□□□□ -1.17
SYNE1-206ENST00000367253 CSF3RQ99062 836 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 GSTO2Q9H4Y5 243 aa7.71□□□□□ -1.17
SYNE1-206ENST00000367253 OR2M5A3KFT3 312 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 B4DEV8 164 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 CA1P00915 261 aaPredicted RBP7.71□□□□□ -1.18
SYNE1-206ENST00000367253 ORM1P02763 201 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 G6PCP35575 357 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 CTSCP53634 463 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 P2RY6Q15077 328 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 OR8G2PQ6IF36 304 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 PRSS35Q8N3Z0 413 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 SLC25A40Q8TBP6 338 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 DOK4Q8TEW6 326 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 OXGR1Q96P68 337 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 GABRG3Q99928 467 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 ACTR3CQ9C0K3 210 aaPredicted RBP7.71□□□□□ -1.18
SYNE1-206ENST00000367253 MED29Q9NX70 200 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 PGPEP1Q9NXJ5 209 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 CGGBP1Q9UFW8 167 aaPredicted RBP7.71□□□□□ -1.18
SYNE1-206ENST00000367253 RNF114Q9Y508 228 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 V9GYY9 64 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 SYT5O00445 386 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 GSTZ1O43708 216 aaPredicted RBP7.71□□□□□ -1.18
SYNE1-206ENST00000367253 PAPLNO95428 1278 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 EML2O95834 649 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 HIST1H1CP16403 213 aaKnown RBP7.71□□□□□ -1.18
SYNE1-206ENST00000367253 GPX3P22352 226 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 PPP1CCP36873 323 aaKnown RBP7.71□□□□□ -1.18
SYNE1-206ENST00000367253 TAS2R45P59539 299 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 CTAG1AP78358 180 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 POU2AF1Q16633 256 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF787Q6DD87 383 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 DUX4L9Q6RFH8 374 aaPredicted RBP7.71□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF788Q6ZQV5 615 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 PGBD5Q8N414 524 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 OR2AK2Q8NG84 335 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 C8orf46Q8TAG6 207 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 FAM222BQ8WU58 562 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 OR10C1Q96KK4 312 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 OR2A14Q96R47 310 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 KLHDC3Q9BQ90 382 aa7.71□□□□□ -1.18
SYNE1-206ENST00000367253 ZBTB42B2RXF5 422 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 PATE3B3GLJ2 98 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 DUSP1P28562 367 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 FCGR2CP31995 323 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 GPR12P47775 334 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 NPBWR2P48146 333 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 NPY4RP50391 375 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 NUTF2P61970 127 aaKnown RBP7.7□□□□□ -1.18
SYNE1-206ENST00000367253 SLC35A2P78381 396 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 FAM3AP98173 230 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 GUCA2AQ02747 115 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 METRNLQ641Q3 311 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 OR5AS1Q8N127 324 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 OR5AP2Q8NGF4 316 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 TMEM106AQ96A25 262 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 RAB37Q96AX2 223 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms