RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ZNF426Q9BUY5 554 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 DUSP21Q9H596 190 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 SIAH2O43255 324 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 TMEM241Q24JQ0 296 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 TGIF2LYQ8IUE0 185 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 ZNF596Q8TC21 504 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 YIPF6Q96EC8 236 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 ABHD14AQ9BUJ0 271 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 ZNF737O75373 536 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 SBK3P0C264 359 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 HIST1H1EP10412 219 aaKnown RBP13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 CCDC144NLQ6NUI1 221 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 OR10G4Q8NGN3 311 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 OR10G9Q8NGN4 311 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 OR10G7Q8NGN6 311 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 OR5C1Q8NGR4 320 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 TFF2Q03403 129 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 HLXQ14774 488 aaPredicted RBP13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 GLDNQ6ZMI3 551 aaPredicted RBP13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 LIAT1Q6ZQX7 453 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 C16orf97H3BN30 126 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 CD40P25942 277 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 AVPR2P30518 371 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 ZNF154Q13106 437 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 ANKRD55Q3KP44 614 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 MIDNQ504T8 468 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 TREM2Q9NZC2 230 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 TRAPPC4Q9Y296 219 aa13.92□□□□□ -0.18
NUCKS1-201ENST00000367142 PYCARD-AS1I3L0S3 204 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 TO15178 435 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 AKR7A2O43488 359 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 MAP6Q96JE9 813 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 AUP1Q9Y679 476 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 A0A1B0GTQ1 180 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 J3KRW8 73 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 MGPP08493 103 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 RPS4Y1P22090 263 aaKnown RBP13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 ASB10Q8WXI3 467 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 LINC00052Q96N35 136 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 KIAA1324LA8MWY0 1029 aaPredicted RBP13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 IGHV3-13P01766 116 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 IGHV3-7P01780 117 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 SLC6A1P30531 599 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 ETFDHQ16134 617 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 CLEC2AQ6UVW9 174 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 DIRC2Q96SL1 478 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 TMEM30AQ9NV96 361 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 IL20Q9NYY1 176 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 VSIG4Q9Y279 399 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 INSIG2Q9Y5U4 225 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 HIST1H3AP68431 136 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 IL13RA2Q14627 380 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 GUK1Q16774 197 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 ZNF275Q9NSD4 429 aaPredicted RBP13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 SPAARA0A1B0GVQ0 90 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 C9orf172C9J069 976 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 SPINK4O60575 86 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 NAAAQ02083 359 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 ZNF683Q8IZ20 524 aa13.91□□□□□ -0.18
NUCKS1-201ENST00000367142 VIRMAQ69YN4 1812 aaKnown RBP13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 CD96P40200 585 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 C3AR1Q16581 482 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 ASCL3Q9NQ33 180 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 CLN8Q9UBY8 286 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 CST2P09228 141 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 ECSCRQ19T08 205 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 PRSS42Q7Z5A4 293 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 WFDC3Q8IUB2 231 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 OR10A7Q8NGE5 316 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 SEC11CQ9BY50 192 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 TRDCB7Z8K6 153 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 GPR6P46095 362 aaPredicted RBP13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 FCN1O00602 326 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 GSTZ1O43708 216 aaPredicted RBP13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 Q7L0L9 218 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 ZNF764Q96H86 408 aaPredicted RBP13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 CIDEAO60543 219 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 FUCA1P04066 466 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 PATE4P0C8F1 98 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 TOMM20LQ6UXN7 152 aa13.9□□□□□ -0.18
NUCKS1-201ENST00000367142 IGKV3-7A0A075B6H7 116 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 PRSS1P07477 247 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 UQCC3Q6UW78 93 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 CADM3Q8N126 398 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 FADS6Q8N9I5 356 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 OR10C1Q96KK4 312 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 WASHC3Q9Y3C0 194 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 SCAND1P57086 179 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 RAE1P78406 368 aaKnown RBP13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 MUC20Q8N307 709 aaPredicted RBP13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 GSX1Q9H4S2 264 aaPredicted RBP13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 C5P01031 1676 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 SLC35B1P78383 322 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 C1orf185Q5T7R7 199 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 FLYWCH2Q96CP2 140 aaKnown RBP13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 MICAL3Q7RTP6 2002 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 DDX60Q8IY21 1712 aaKnown RBP13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 EDIL3O43854 480 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 CELA2BP08218 269 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms