RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 HAND1O96004 215 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 RBP4P02753 201 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 CDK1P06493 297 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 BCL3P20749 454 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 C21orf33P30042 268 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-218ENST00000366747 ZP1P60852 638 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 COL10A1Q03692 680 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 BAMBIQ13145 260 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 Q499Y3 187 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 FAM185AQ8N0U4 392 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 BCL6BQ8N143 479 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-218ENST00000366747 NANOGP1Q8N7R0 232 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 ASCC1Q8N9N2 400 aaKnown RBP12.03□□□□□ -0.48
MRPL55-218ENST00000366747 CHST4Q8NCG5 386 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 LHX4Q969G2 390 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 SLC25A28Q96A46 364 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 PGLYRP3Q96LB9 341 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 ZNF48Q96MX3 618 aaPredicted RBP12.03□□□□□ -0.48
MRPL55-218ENST00000366747 CDCA4Q9BXL8 241 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 RBFOX1Q9NWB1 397 aaKnown RBP12.03□□□□□ -0.48
MRPL55-218ENST00000366747 CKLFQ9UBR5 152 aa12.03□□□□□ -0.48
MRPL55-218ENST00000366747 IGHV3OR16-10A0A075B7F0 116 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 FUOMA2VDF0 154 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 DNAJC9-AS1A6NH13 148 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 F8VVB4 439 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 F8VWA3 439 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 SH2D1BO14796 132 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 SPRY1O43609 319 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-218ENST00000366747 LALBAP00709 142 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 TFF1P04155 84 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 RNASE1P07998 156 aaKnown RBP12.02□□□□□ -0.49
MRPL55-218ENST00000366747 FSTP19883 344 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 MAPK3P27361 379 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-218ENST00000366747 NPBWR2P48146 333 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 SOX2P48431 317 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 MTNR1BP49286 362 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 UBE2E1P51965 193 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 MEF2CQ06413 473 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-218ENST00000366747 ELP2Q6IA86 826 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 BRD3OSQ6XYD6 125 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 GDPD3Q7L5L3 318 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 Q8N7P7 452 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 ZDHHC16Q969W1 377 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 EXOSC4Q9NPD3 245 aaKnown RBP12.02□□□□□ -0.49
MRPL55-218ENST00000366747 ESM1Q9NQ30 184 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 C19orf12Q9NSK7 152 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 SF3B6Q9Y3B4 125 aaKnown RBP12.02□□□□□ -0.49
MRPL55-218ENST00000366747 POMT1Q9Y6A1 747 aa12.02□□□□□ -0.49
MRPL55-218ENST00000366747 SIRT4Q9Y6E7 314 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-218ENST00000366747 IGKV1-12A0A0C4DH73 117 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 MGST3O14880 152 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 RGS9O75916 674 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-218ENST00000366747 IGKV1D-12P01611 117 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 TMEM225BP0DP42 221 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 PRKACAP17612 351 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 LMO1P25800 156 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 ERP29P30040 261 aaKnown RBP12.01□□□□□ -0.49
MRPL55-218ENST00000366747 CEBPDP49716 269 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-218ENST00000366747 COMPP49747 757 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-218ENST00000366747 RPL15P61313 204 aaKnown RBP12.01□□□□□ -0.49
MRPL55-218ENST00000366747 ACTG1P63261 375 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 SLC35A2P78381 396 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 SRSF2Q01130 221 aaKnown RBP12.01□□□□□ -0.49
MRPL55-218ENST00000366747 DEFB112Q30KQ8 113 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 CRIP3Q6Q6R5 217 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 IZUMO2Q6UXV1 221 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 Q6YL49 198 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 LDLRAD3Q86YD5 345 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 CDH26Q8IXH8 852 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 BATF2Q8N1L9 274 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-218ENST00000366747 TNFRSF14Q92956 283 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 RFT1Q96AA3 541 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 SPACA5Q96QH8 159 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 GPER1Q99527 375 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 HEXA-AS1Q9H8Q6 139 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 ELL3Q9HB65 397 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-218ENST00000366747 SIRT7Q9NRC8 400 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 PCDHB16Q9NRJ7 776 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 PAK1IP1Q9NWT1 392 aaPredicted RBP12.01□□□□□ -0.49
MRPL55-218ENST00000366747 TAS2R4Q9NYW5 299 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 BLOC1S6Q9UL45 172 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 RAB26Q9ULW5 256 aa12.01□□□□□ -0.49
MRPL55-218ENST00000366747 hADV38S2A0JD32 116 aa12□□□□□ -0.49
MRPL55-218ENST00000366747 TMEM89A2RUT3 159 aa12□□□□□ -0.49
MRPL55-218ENST00000366747 ANGPTL7O43827 346 aa12□□□□□ -0.49
MRPL55-218ENST00000366747 ZNF780AO75290 641 aaPredicted RBP12□□□□□ -0.49
MRPL55-218ENST00000366747 CSN2P05814 226 aa12□□□□□ -0.49
MRPL55-218ENST00000366747 FBP1P09467 338 aa12□□□□□ -0.49
MRPL55-218ENST00000366747 IGFBP3P17936 291 aaPredicted RBP12□□□□□ -0.49
MRPL55-218ENST00000366747 CELP19835 753 aa12□□□□□ -0.49
MRPL55-218ENST00000366747 BDKRB2P30411 391 aa12□□□□□ -0.49
MRPL55-218ENST00000366747 ERVFRD-1P60508 538 aa12□□□□□ -0.49
MRPL55-218ENST00000366747 RPS11P62280 158 aaKnown RBP eCLIP12□□□□□ -0.49
MRPL55-218ENST00000366747 GPR50Q13585 617 aa12□□□□□ -0.49
MRPL55-218ENST00000366747 IL13RA2Q14627 380 aa12□□□□□ -0.49
MRPL55-218ENST00000366747 MIDNQ504T8 468 aa12□□□□□ -0.49
MRPL55-218ENST00000366747 TMEM200BQ69YZ2 307 aa12□□□□□ -0.49
MRPL55-218ENST00000366747 ASPHD2Q6ICH7 369 aa12□□□□□ -0.49
MRPL55-218ENST00000366747 ASCL4Q6XD76 172 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms