RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 SIGLECL1Q8N7X8 197 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 SPERTQ8NA61 448 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 OR10K1Q8NGX5 313 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 LRRC29Q8WV35 223 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 SLC25A28Q96A46 364 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 SEH1LQ96EE3 360 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 CYYR1Q96J86 154 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 C1orf147Q96MC9 270 aaPredicted RBP6.81□□□□□ -1.32
MRPL55-211ENST00000366738 GPER1Q99527 375 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 PKIBQ9C010 78 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 WDR13Q9H1Z4 485 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 NEK6Q9HC98 313 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 RBFOX1Q9NWB1 397 aaKnown RBP6.81□□□□□ -1.32
MRPL55-211ENST00000366738 MTCH1Q9NZJ7 389 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 IL36RNQ9UBH0 155 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 V9GY05 133 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 ARHGAP32A7KAX9 2087 aa6.81□□□□□ -1.32
MRPL55-211ENST00000366738 TENM3Q9P273 2699 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 DNAJC9-AS1A6NH13 148 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 IFITM5A6NNB3 132 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 NOTOA8MTQ0 251 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.8□□□□□ -1.32
MRPL55-211ENST00000366738 AIPO00170 330 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 SLC17A2O00624 439 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 PDCD5O14737 125 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 SLC22A1O15245 554 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 IL1AP01583 271 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 SFTPBP07988 381 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 CD37P11049 281 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 ZNF182P17025 639 aaPredicted RBP6.8□□□□□ -1.32
MRPL55-211ENST00000366738 TNFRSF1AP19438 455 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 BCL3P20749 454 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 CD80P33681 288 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 PTGFRP43088 359 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 MZT1Q08AG7 82 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 IL24Q13007 206 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 RAB11BQ15907 218 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 TUSC1Q2TAM9 212 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 C1orf100Q5SVJ3 147 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 OR10K2Q6IF99 312 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 GLIPR1L1Q6UWM5 242 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 TPRA1Q86W33 373 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 ZNF573Q86YE8 665 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 BOLLQ8N9W6 283 aaKnown RBP6.8□□□□□ -1.32
MRPL55-211ENST00000366738 POC1AQ8NBT0 407 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 Q8TCH9 128 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 DYNC2LI1Q8TCX1 351 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 CCL17Q92583 94 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 SLC25A46Q96AG3 418 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 BCL7BQ9BQE9 202 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 UQCC2Q9BRT2 126 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 DCUN1D5Q9BTE7 237 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 EGLN1Q9GZT9 426 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 FN3KRPQ9HA64 309 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 PLGRKTQ9HBL7 147 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 SMURF1Q9HCE7 757 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 TMEM106BQ9NUM4 274 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 ZNF581Q9P0T4 197 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 DAPK2Q9UIK4 370 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 PPP1R3CQ9UQK1 317 aa6.8□□□□□ -1.32
MRPL55-211ENST00000366738 MRPS28Q9Y2Q9 187 aaKnown RBP6.8□□□□□ -1.32
MRPL55-211ENST00000366738 IGHV3OR15-7A0A075B7D8 119 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 A0A1B0GW55 424 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 MEGF11A6BM72 1044 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 SRRM5B3KS81 715 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 TMEM178BH3BS89 294 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 ZNF701M0R085 212 aaPredicted RBP6.79□□□□□ -1.32
MRPL55-211ENST00000366738 KDM4BO94953 1096 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 PAHP00439 452 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 DUX4L2P0CJ85 424 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 DUX4L3P0CJ86 424 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 DUX4L4P0CJ87 422 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 DUX4L5P0CJ88 424 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 DUX4L6P0CJ89 424 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 DUX4L7P0CJ90 424 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 PGA5P0DJD9 388 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 TMEM225BP0DP42 221 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 VSIG8P0DPA2 414 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 SNRPBP14678 240 aaKnown RBP6.79□□□□□ -1.32
MRPL55-211ENST00000366738 SERPINA2P20848 420 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 HTR2CP28335 458 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 CEBPDP49716 269 aaPredicted RBP6.79□□□□□ -1.32
MRPL55-211ENST00000366738 SNU13P55769 128 aaKnown RBP6.79□□□□□ -1.32
MRPL55-211ENST00000366738 ERVK11-1P61568 191 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 SEC61A1P61619 476 aaKnown RBP6.79□□□□□ -1.32
MRPL55-211ENST00000366738 QRFPP83859 136 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 SRSF4Q08170 494 aaKnown RBP6.79□□□□□ -1.32
MRPL55-211ENST00000366738 UNC119Q13432 240 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 PIGYQ3MUY2 71 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 IDNKQ5T6J7 187 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 SFRP4Q6FHJ7 346 aaPredicted RBP6.79□□□□□ -1.32
MRPL55-211ENST00000366738 DUX4L9Q6RFH8 374 aaPredicted RBP6.79□□□□□ -1.32
MRPL55-211ENST00000366738 RTN4RL2Q86UN3 420 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 C1QL4Q86Z23 238 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 TEX29Q8N6K0 151 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 PNLDC1Q8NA58 520 aaKnown RBP6.79□□□□□ -1.32
MRPL55-211ENST00000366738 TMEM104Q8NE00 496 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 PXT1Q8NFP0 134 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 OR51D1Q8NGF3 324 aa6.79□□□□□ -1.32
MRPL55-211ENST00000366738 OR6M1Q8NGM8 313 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms