RNA–Protein interactions for RNA: ENST00000366695.3

HIST3H2A-201, Transcript of histone cluster 3 H2A, humanhuman

APPRIS P1 BASIC

Gene HIST3H2A, Length 895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2A-201ENST00000366695 RORCP51449 518 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 CLDN12P56749 244 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 RBM11P57052 281 aaKnown RBP12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 LOXL1Q08397 574 aaPredicted RBP12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 SPCS2Q15005 226 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 C2orf76Q3KRA6 126 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 IDNKQ5T6J7 187 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 ZNF788Q6ZQV5 615 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 NLRC3Q7RTR2 1065 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 SLC36A1Q7Z2H8 476 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 OR5T2Q8NGG2 359 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 CLDND2Q8NHS1 167 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 KCTD12Q96CX2 325 aaKnown RBP12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 RAB39BQ96DA2 213 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 SDSLQ96GA7 329 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 MED30Q96HR3 178 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 REG4Q9BYZ8 158 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 ZNF665Q9H7R5 613 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 PATZ1Q9HBE1 687 aaKnown RBP12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 IL36RNQ9UBH0 155 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 ST3GAL6Q9Y274 331 aa12.85□□□□□ -0.35
HIST3H2A-201ENST00000366695 CCDC168Q8NDH2 2452 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 IGHV4-61A0A0C4DH41 118 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 A0A1W2PP11 408 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM90A10PA6NDY2 464 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM90A18PA6NE21 464 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM90A16PA6NEW6 464 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM90A20PA6NIJ5 464 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM90A8PA6NJQ4 464 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM90A7PA6NKC0 464 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM90A22PA8MWA6 464 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM90A12PA8MX19 464 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM90A5PA8MXJ8 464 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM90A23PA8MXZ1 464 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 F5H0A9 414 aaPredicted RBP12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 LDLRAD4O15165 306 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 HAND1O96004 215 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 IGHV2-5P01817 119 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 CHRM2P08172 466 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM90A15PP0C7V4 464 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM90A13PP0C7W8 464 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM90A14PP0C7W9 464 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM90A24PP0C7X0 464 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 RPS2P15880 293 aaKnown RBP12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 GABRA2P47869 451 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 DYNC1I2Q13409 638 aaKnown RBP12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 UNC119Q13432 240 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM189A2Q15884 450 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 MPV17LQ2QL34 196 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 ZNF561Q8N587 486 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 CHST4Q8NCG5 386 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 TMEM104Q8NE00 496 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 FAM46BQ96A09 425 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 PTX4Q96A99 478 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 DGCR14Q96DF8 476 aaKnown RBP12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 TMEM59Q9BXS4 323 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 BANF2Q9H503 90 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 NARFLQ9H6Q4 476 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 IFT22Q9H7X7 185 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 ABRACLQ9P1F3 81 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 OR14J1Q9UGF5 321 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 RAB22AQ9UL26 194 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 ETV7Q9Y603 341 aa12.84□□□□□ -0.35
HIST3H2A-201ENST00000366695 TMEM272A0A1B0GTI8 110 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 RNF223E7ERA6 249 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 H3BUI4 141 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 SIGLEC5O15389 551 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 TMPRSS2O15393 492 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 ADAM20O43506 726 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 MPIG6BO95866 241 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 WNT2P09544 360 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 AMY2BP19961 511 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 RAB6AP20340 208 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 SOX6P35712 828 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 NPY4RP50391 375 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 SNU13P55769 128 aaKnown RBP12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 LMO4P61968 165 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 RPS27AP62979 156 aaKnown RBP12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 IL13RA1P78552 427 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 PIGYQ3MUY2 71 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 OR10K2Q6IF99 312 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 LYPD2Q6UXB3 125 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 CD177Q8N6Q3 437 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 OR8B3Q8NGG8 313 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 DYNC2LI1Q8TCX1 351 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 NEIL1Q96FI4 390 aaPredicted RBP12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 Q96M66 194 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 GAFA1Q96PS6 74 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 OR8B2Q96RD0 313 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 CCL13Q99616 98 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 URM1Q9BTM9 101 aaKnown RBP12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 TM2D1Q9BX74 207 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 BARHL1Q9BZE3 327 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 SELENOIQ9C0D9 397 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 KCNK15Q9H427 330 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 BATF3Q9NR55 127 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 CCDC59Q9P031 241 aaKnown RBP12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 OR5V1Q9UGF6 321 aa12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 SETXQ7Z333 2677 aaKnown RBP12.83□□□□□ -0.36
HIST3H2A-201ENST00000366695 A0A0B4J203 849 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms