RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 MRPL22Q9NWU5 206 aaKnown RBP1.2□□□□□ -2.22
RNU4-28P-201ENST00000364739 SERTM2A0A1B0GWG4 89 aa1.19□□□□□ -2.22
RNU4-28P-201ENST00000364739 GOLGA8TH3BQL2 631 aa1.19□□□□□ -2.22
RNU4-28P-201ENST00000364739 RNF113AO15541 343 aaKnown RBP1.19□□□□□ -2.22
RNU4-28P-201ENST00000364739 OPN1SWP03999 348 aa1.19□□□□□ -2.22
RNU4-28P-201ENST00000364739 COL4A2P08572 1712 aa1.19□□□□□ -2.22
RNU4-28P-201ENST00000364739 HOXB8P17481 243 aaPredicted RBP1.19□□□□□ -2.22
RNU4-28P-201ENST00000364739 ZNF436Q9C0F3 470 aaPredicted RBP1.19□□□□□ -2.22
RNU4-28P-201ENST00000364739 RRP15Q9Y3B9 282 aaKnown RBP1.19□□□□□ -2.22
RNU4-28P-201ENST00000364739 FADS3Q9Y5Q0 445 aa1.19□□□□□ -2.22
RNU4-28P-201ENST00000364739 TRPM3Q9HCF6 1732 aaPredicted RBP1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 ZNF638Q14966 1978 aaKnown RBP1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 FAM240AA0A1B0GVK7 77 aa1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 ARL14EPLP0DKL9 152 aa1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 GTF2F2P13984 249 aa1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 PMCHP20382 165 aa1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 S100A2P29034 98 aa1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 ST3GAL4Q11206 333 aa1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 ZNF404Q494X3 552 aa1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 CDNFQ49AH0 187 aa1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 SCXQ7RTU7 201 aa1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 DPPA2Q7Z7J5 298 aa1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 UBA3Q8TBC4 463 aa1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 C22orf15Q8WYQ4 148 aa1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 CLSTN2Q9H4D0 955 aa1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 C8orf33Q9H7E9 229 aaPredicted RBP1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 SBNO1A3KN83 1393 aa1.18□□□□□ -2.22
RNU4-28P-201ENST00000364739 S1PR2O95136 353 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 HLA-AP01891 365 aaKnown RBP1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 TAC1P20366 129 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 MLF1P58340 268 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 IL18Q14116 193 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 HES1Q14469 280 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 TNXAQ16473 311 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 FAM27D1Q5T7N8 215 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 CLEC2AQ6UVW9 174 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 NDNFQ8TB73 568 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 PIH1D2Q8WWB5 315 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 NAT6Q93015 286 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 TSSK6Q9BXA6 273 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 CHRNA10Q9GZZ6 450 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 ARMC7Q9H6L4 198 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 EXO5Q9H790 373 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 DDIT4Q9NX09 232 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 TFR2Q9UP52 801 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 CCL26Q9Y258 94 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 CHTOPQ9Y3Y2 248 aaKnown RBP1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 HSPE1-MOB4S4R3N1 261 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 NSD2O96028 1365 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 ARHGAP32A7KAX9 2087 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 NCKAP5O14513 1909 aa1.17□□□□□ -2.22
RNU4-28P-201ENST00000364739 PHLPP2Q6ZVD8 1323 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 SUPT3HB4E1H0 165 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 RLN2P04090 185 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 KLK1P06870 262 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 GABRA1P14867 456 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 LCN2P80188 198 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 LRRC74AQ0VAA2 488 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 GPR176Q14439 515 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 UBE2NLQ5JXB2 153 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 MARCH3Q86UD3 253 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 MFSD8Q8NHS3 518 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 ZFAND1Q8TCF1 268 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 ZNF625Q96I27 306 aaPredicted RBP1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 YPEL4Q96NS1 127 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 OR2AG1Q9H205 316 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 C6orf50Q9HD87 102 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 RBM12B-AS1Q9P1G2 102 aa1.16□□□□□ -2.22
RNU4-28P-201ENST00000364739 ZNF860A6NHJ4 632 aa1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 ZNF701M0R085 212 aaPredicted RBP1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 TRAPPC6AO75865 159 aa1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 PRDX4Q13162 271 aa1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 CASP8Q14790 479 aa1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 PYCR3Q53H96 274 aa1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 ANGPTL8Q6UXH0 198 aa1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 OR2W3Q7Z3T1 314 aa1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 SETD3Q86TU7 594 aaPredicted RBP1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 NT5CQ8TCD5 201 aa1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 TCP10LQ8TDR4 215 aa1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 TFGQ92734 400 aaPredicted RBP1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 QKIQ96PU8 341 aaKnown RBP eCLIP1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 ULBP1Q9BZM6 244 aa1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 OR2D2Q9H210 308 aa1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 RABL2BQ9UNT1 228 aa1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 SDK1Q7Z5N4 2213 aa1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 NOS1P29475 1434 aa1.15□□□□□ -2.23
RNU4-28P-201ENST00000364739 A0A0J9YYE9 177 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 A0A1B0GTI1 187 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 C17orf98A8MV24 154 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 F5H5T6 163 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 KLRC4-KLRK1H3BQV0 150 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 GYG2O15488 501 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 ZNF189O75820 626 aaPredicted RBP1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 PDYNP01213 254 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 TRBC1P01850 177 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 SOD3P08294 240 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 TUBG1P23258 451 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 MAGEA6P43360 314 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 IFFO1Q0D2I5 559 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 NIPAL1Q6NVV3 410 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms