RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 PRR33A8MZF0 331 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 ST8SIA3O43173 380 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 CYC1P08574 325 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 ZNF133P52736 654 aaPredicted RBP16.62■□□□□ 0.25
CMTM3-201ENST00000361909 EFNA3P52797 238 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 LSM6P62312 80 aaKnown RBP16.62■□□□□ 0.25
CMTM3-201ENST00000361909 DLK1P80370 383 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 PLXDC2Q6UX71 529 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 DOK3Q7L591 496 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 GALNTL5Q7Z4T8 443 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 ZNF429Q86V71 674 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 ZNF721Q8TF20 911 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 RBMXL1Q96E39 390 aaKnown RBP16.62■□□□□ 0.25
CMTM3-201ENST00000361909 FAM230AA0A1W2PPH8 454 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 SMCO3A2RU48 225 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 VSTM2BA6NLU5 285 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 C1QL1O75973 258 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 DDAH2O95865 285 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 FGF7P21781 194 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 ZNF506Q5JVG8 444 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 OR2T2Q6IF00 324 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 BEND2Q8NDZ0 799 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 C11orf40Q8WZ69 217 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 ADIPOR1Q96A54 375 aa16.62■□□□□ 0.25
CMTM3-201ENST00000361909 DVL1O14640 695 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 SFTPDP35247 375 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 ERVFRD-1P60508 538 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 TMEM187Q14656 261 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 DPPA3Q6W0C5 159 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 SUMF1Q8NBK3 374 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 HSD17B11Q8NBQ5 300 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 OR10AD1Q8NGE0 317 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 RNASEH2CQ8TDP1 164 aaKnown RBP16.61■□□□□ 0.25
CMTM3-201ENST00000361909 BSCL2Q96G97 398 aaPredicted RBP16.61■□□□□ 0.25
CMTM3-201ENST00000361909 RTN4RQ9BZR6 473 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 KLHL13Q9P2N7 655 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 CYB5BO43169 146 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 TSPAN2O60636 221 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 HBE1P02100 147 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 NDUFB7P17568 137 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 BLVRBP30043 206 aaPredicted RBP16.61■□□□□ 0.25
CMTM3-201ENST00000361909 PNRC1Q12796 327 aaPredicted RBP16.61■□□□□ 0.25
CMTM3-201ENST00000361909 AKR1C8PQ5T2L2 129 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 ABHD12BQ7Z5M8 362 aaPredicted RBP16.61■□□□□ 0.25
CMTM3-201ENST00000361909 OR10S1Q8NGN2 331 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 TMEM234Q8WY98 164 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 PACRGQ96M98 296 aaPredicted RBP16.61■□□□□ 0.25
CMTM3-201ENST00000361909 NEU1Q99519 415 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 PITPNC1Q9UKF7 332 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 A0A0C4DFX4 3053 aa16.61■□□□□ 0.25
CMTM3-201ENST00000361909 MYO15AQ9UKN7 3530 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 B4E171 279 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 MS4A18H0YCH9 400 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 HSPA12AO43301 675 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 PITX3O75364 302 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 ATXN8OSP0DMR3 200 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 TSPAN7P41732 249 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 RND2P52198 227 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 RND3P61587 244 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 CHAF1BQ13112 559 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 GNMTQ14749 295 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 MS4A18Q3C1V0 323 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 SPSB3Q6PJ21 355 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 FBXW12Q6X9E4 464 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 H1FNTQ75WM6 255 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-201ENST00000361909 SLC16A14Q7RTX9 510 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 COMMD2Q86X83 199 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 OR14L1PQ8NHC6 308 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 GPR119Q8TDV5 335 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 C18orf12Q96KH6 178 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 SPACA5Q96QH8 159 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 RARRES2Q99969 163 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 OR8D2Q9GZM6 311 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 WDFY4Q6ZS81 3184 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 HLA-DOBP13765 273 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 LIAT1Q6ZQX7 453 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 DMRTC2Q8IXT2 367 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-201ENST00000361909 PRSS58Q8IYP2 241 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 OR1N1Q8NGS0 311 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 DNAJA3Q96EY1 480 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 SLC25A31Q9H0C2 315 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 TMEM9BQ9NQ34 198 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 ZNF701Q9NV72 531 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-201ENST00000361909 COPS7AQ9UBW8 275 aa16.6■□□□□ 0.25
CMTM3-201ENST00000361909 COL27A1Q8IZC6 1860 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-201ENST00000361909 A0A1W2PP11 408 aa16.59■□□□□ 0.25
CMTM3-201ENST00000361909 ZNF727A8MUV8 499 aa16.59■□□□□ 0.25
CMTM3-201ENST00000361909 SCAF4O95104 1147 aaKnown RBP16.59■□□□□ 0.25
CMTM3-201ENST00000361909 TRGC2P03986 189 aa16.59■□□□□ 0.25
CMTM3-201ENST00000361909 FABP4P15090 132 aa16.59■□□□□ 0.25
CMTM3-201ENST00000361909 ZNF43P17038 809 aa16.59■□□□□ 0.25
CMTM3-201ENST00000361909 PIGPP57054 158 aa16.59■□□□□ 0.25
CMTM3-201ENST00000361909 HSF1Q00613 529 aa16.59■□□□□ 0.25
CMTM3-201ENST00000361909 JOSD1Q15040 202 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-201ENST00000361909 SP5Q6BEB4 398 aaPredicted RBP16.59■□□□□ 0.25
CMTM3-201ENST00000361909 LGI3Q8N145 548 aa16.59■□□□□ 0.25
CMTM3-201ENST00000361909 OR8B12Q8NGG6 310 aa16.59■□□□□ 0.25
CMTM3-201ENST00000361909 BOD1Q96IK1 185 aa16.59■□□□□ 0.25
CMTM3-201ENST00000361909 FAM210BQ96KR6 192 aa16.59■□□□□ 0.25
CMTM3-201ENST00000361909 GPR84Q9NQS5 396 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms