RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 RGCCQ9H4X1 137 aa12□□□□□ -0.49
CSNK1E-201ENST00000359867 GP6Q9HCN6 339 aa12□□□□□ -0.49
CSNK1E-201ENST00000359867 TMEM235A6NFC5 223 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 IGHV3-9P01782 118 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 S100A8P05109 93 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 SNAI3Q3KNW1 292 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 ZNF260Q3ZCT1 412 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 C9orf106Q8NAJ2 232 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 FAM57AQ8TBR7 257 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 APH1AQ96BI3 265 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 ZNF471Q9BX82 626 aaPredicted RBP11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 SEBOXQ9HB31 216 aaPredicted RBP11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 PIGLQ9Y2B2 252 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 OR5H14A6NHG9 310 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 DISC1C4P0D8 188 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 F12P00748 615 aaPredicted RBP11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 TAS2R19P59542 299 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 ARF1P84077 181 aaKnown RBP11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 ANKRD39Q53RE8 183 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 AVPI1Q5T686 147 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 RTL6Q6ICC9 239 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 ZNF101Q8IZC7 436 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 BPIFB2Q8N4F0 458 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 SEMA6DQ8NFY4 1073 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 FGFBP3Q8TAT2 258 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 RHOVQ96L33 236 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 C1orf147Q96MC9 270 aaPredicted RBP11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 GPER1Q99527 375 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 TSNAXQ99598 290 aaKnown RBP11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 SLC6A7Q99884 636 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 VRK1Q99986 396 aaPredicted RBP11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 SPOCK3Q9BQ16 436 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 UPB1Q9UBR1 384 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 PLEKHA6Q9Y2H5 1048 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 FAM215AQ9Y5M1 114 aa11.99□□□□□ -0.49
CSNK1E-201ENST00000359867 AHRRA9YTQ3 701 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 HLA-AP01891 365 aaKnown RBP11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 LCATP04180 440 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 PATE4P0C8F1 98 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 CD34P28906 385 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 DHRS2Q13268 280 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 SLC22A6Q4U2R8 563 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 TMEM185AQ8NFB2 350 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 CMBLQ96DG6 245 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 REEP6Q96HR9 211 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 C12orf49Q9H741 205 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 UFSP2Q9NUQ7 469 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 KANTRA0A1W2PQU2 76 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 COX5BP10606 129 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 FAHP16930 419 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 OR3A4PP47883 348 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 ATP1B3P54709 279 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 HGFACQ04756 655 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 RIPPLY1Q0D2K3 151 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 HABP2Q14520 560 aaPredicted RBP11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 KISS1Q15726 138 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 MPPED2Q15777 294 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 UBE2V2Q15819 145 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 SEM1Q6ZVN7 128 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 NUFIP2Q7Z417 695 aaKnown RBP11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 ZNF100Q8IYN0 542 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 OR10R2Q8NGX6 335 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 CCDC107Q8WV48 283 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 SPACA5Q96QH8 159 aa11.98□□□□□ -0.49
CSNK1E-201ENST00000359867 FIGNL2A6NMB9 653 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 FCGR2AP12318 317 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 MGMTP16455 207 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 RPS27AP62979 156 aaKnown RBP11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 UBA52P62987 128 aaKnown RBP11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 CDNFQ49AH0 187 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 OR52W1Q6IF63 320 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 UNQ6126/PRO20091Q6UXV3 157 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 RTN4RL2Q86UN3 420 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 GVQW1Q8N7I0 195 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 LPAR5Q9H1C0 372 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 RASL12Q9NYN1 266 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 C5orf52A6NGY3 159 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 ZNF736B4DX44 427 aaPredicted RBP11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 CDC14BO60729 498 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 CYB5AP00167 134 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 ZNF735P0CB33 412 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 ADCYAP1P18509 176 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 AGTR1P30556 359 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 RNF144BQ7Z419 303 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 DOLPP1Q86YN1 238 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 OR13C8Q8NGS7 320 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 CASTOR1Q8WTX7 329 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 SPSB1Q96BD6 273 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 CPNE2Q96FN4 548 aaPredicted RBP11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 URM1Q9BTM9 101 aaKnown RBP11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 SLC25A32Q9H2D1 315 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 VSIG4Q9Y279 399 aa11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 INTS1Q8N201 2190 aaKnown RBP11.97□□□□□ -0.49
CSNK1E-201ENST00000359867 PRRG2O14669 202 aa11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 XRCC2O43543 280 aa11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 WDR1O75083 606 aa11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 EDN3P14138 238 aa11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 DEFA6Q01524 100 aa11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 FOXF2Q12947 444 aa11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 NSUN5P2Q63ZY6 315 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms