RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ATPAF1Q5TC12 328 aaPredicted RBP10.38□□□□□ -0.75
NIF3L1-201ENST00000359683 OSR2Q8N2R0 312 aa10.38□□□□□ -0.75
NIF3L1-201ENST00000359683 DEFB108BQ8NET1 73 aa10.38□□□□□ -0.75
NIF3L1-201ENST00000359683 PTX4Q96A99 478 aa10.38□□□□□ -0.75
NIF3L1-201ENST00000359683 KCNK15Q9H427 330 aa10.38□□□□□ -0.75
NIF3L1-201ENST00000359683 CCDC59Q9P031 241 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-201ENST00000359683 DNAJB11Q9UBS4 358 aa10.38□□□□□ -0.75
NIF3L1-201ENST00000359683 OR2AT4A6NND4 320 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 CRTAPO75718 401 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 MGMTP16455 207 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 AMY2BP19961 511 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 SOX6P35712 828 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 MDH2P40926 338 aaKnown RBP10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 ZNF404Q494X3 552 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 TMEM155Q4W5P6 130 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 SHEQ5VZ18 495 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 STUMQ69YW2 141 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 KRTAP1-3Q8IUG1 177 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 OR5T2Q8NGG2 359 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 OR5H6Q8NGV6 325 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 ANGPTL6Q8NI99 470 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 ACOT12Q8WYK0 555 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 TMEM246Q9BRR3 403 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 SLIRPQ9GZT3 109 aaKnown RBP10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 BANF2Q9H503 90 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 IL36RNQ9UBH0 155 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 ZNF222Q9UK12 451 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 RAB22AQ9UL26 194 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 SPATA2Q9UM82 520 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 ETV7Q9Y603 341 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 MTORP42345 2549 aa10.37□□□□□ -0.75
NIF3L1-201ENST00000359683 IGKV1D-17A0A075B6S4 117 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 RFPL4AA6NLU0 287 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 RFPL4AL1F8VTS6 287 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 NDUFA2O43678 99 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 MPIG6BO95866 241 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 RAB6AP20340 208 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 NR4A2P43354 598 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 RBM11P57052 281 aaKnown RBP10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 RPS27AP62979 156 aaKnown RBP10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 PLA2G7Q13093 441 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 IL13RA2Q14627 380 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 KCNJ8Q15842 424 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 PIGYQ3MUY2 71 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 SPIN3Q5JUX0 258 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 AVPI1Q5T686 147 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 Q6P435 159 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FIP1L1Q6UN15 594 aaKnown RBP10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 MUC20Q8N307 709 aaPredicted RBP10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 LGALS14Q8TCE9 139 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 AP3S1Q92572 193 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM46BQ96A09 425 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 Q96M66 194 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 PIMREGQ9BSJ6 248 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 DCUN1D5Q9BTE7 237 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 TM2D1Q9BX74 207 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 TMEM59Q9BXS4 323 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 SELENOIQ9C0D9 397 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 BPESC1Q9GZL8 116 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 DNTTIP1Q9H147 329 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 PLA2G2EQ9NZK7 142 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 ST3GAL6Q9Y274 331 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 IGHV4-30-2A0A087WSY4 118 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM90A10PA6NDY2 464 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM90A18PA6NE21 464 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM90A16PA6NEW6 464 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM90A20PA6NIJ5 464 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM90A8PA6NJQ4 464 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM90A7PA6NKC0 464 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM90A22PA8MWA6 464 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM90A12PA8MX19 464 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM90A5PA8MXJ8 464 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM90A23PA8MXZ1 464 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 GYPAP02724 150 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM90A15PP0C7V4 464 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM90A13PP0C7W8 464 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM90A14PP0C7W9 464 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM90A24PP0C7X0 464 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 DUSP1P28562 367 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 PRDX2P32119 198 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 EFNB2P52799 333 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 Q5PR19 223 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 ZNF788Q6ZQV5 615 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 DCDC5Q6ZRR9 648 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 LINC00596Q86U02 117 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 FAM89BQ8N5H3 189 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 CD177Q8N6Q3 437 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 SDSLQ96GA7 329 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 URM1Q9BTM9 101 aaKnown RBP10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 NXF2Q9GZY0 626 aaKnown RBP10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 LPAR5Q9H1C0 372 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 KAAG1Q9UBP8 84 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 GLS2Q9UI32 602 aa10.36□□□□□ -0.75
NIF3L1-201ENST00000359683 A0A075B6Q4 140 aa10.35□□□□□ -0.75
NIF3L1-201ENST00000359683 SH2D1BO14796 132 aa10.35□□□□□ -0.75
NIF3L1-201ENST00000359683 GEMIN2O14893 280 aaKnown RBP10.35□□□□□ -0.75
NIF3L1-201ENST00000359683 HAND1O96004 215 aa10.35□□□□□ -0.75
NIF3L1-201ENST00000359683 CHRM2P08172 466 aa10.35□□□□□ -0.75
NIF3L1-201ENST00000359683 SLC25A16P16260 332 aa10.35□□□□□ -0.75
NIF3L1-201ENST00000359683 LMO1P25800 156 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms