RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 DAP3P51398 398 aaKnown RBP13.04□□□□□ -0.32
UBAP1-202ENST00000359544 PIGPP57054 158 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 FMODQ06828 376 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 ASB10Q8WXI3 467 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 SLC46A1Q96NT5 459 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 GPR84Q9NQS5 396 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 NPIPA1Q9UND3 350 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 ADAMTS9Q9P2N4 1935 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 FAM221BA6H8Z2 402 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 EREGO14944 169 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 PITX3O75364 302 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 CYB5R3P00387 301 aaPredicted RBP13.04□□□□□ -0.32
UBAP1-202ENST00000359544 GALNSP34059 522 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 NOVA1P51513 510 aaKnown RBP13.04□□□□□ -0.32
UBAP1-202ENST00000359544 ABCA11PQ4W5N1 156 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 OOSP2Q86WS3 158 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 CCL4L1Q8NHW4 92 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 R3HDM4Q96D70 268 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 CLDN16Q9Y5I7 305 aa13.04□□□□□ -0.32
UBAP1-202ENST00000359544 FREM3P0C091 2139 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 SPTBN2O15020 2390 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 A6NCN8 305 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 MBP02144 154 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 AMBPP02760 352 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 OPN1MWP04001 364 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 OPN1MW2P0DN77 364 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 OPN1MW3P0DN78 364 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 EIF3IQ13347 325 aaKnown RBP13.03□□□□□ -0.32
UBAP1-202ENST00000359544 CADM4Q8NFZ8 388 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 BOD1Q96IK1 185 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 ADOQ96SZ5 270 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 CDH20Q9HBT6 801 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 HRASLS2Q9NWW9 162 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 PI4KAP42356 2102 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 CD200P41217 278 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 RPL23AP62750 156 aaKnown RBP13.03□□□□□ -0.32
UBAP1-202ENST00000359544 TLE4Q04727 773 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 LIAT1Q6ZQX7 453 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 SLC16A14Q7RTX9 510 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 ABHD12BQ7Z5M8 362 aaPredicted RBP13.03□□□□□ -0.32
UBAP1-202ENST00000359544 C5orf24Q7Z6I8 188 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 OR1P1Q8NH06 330 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 LOXL4Q96JB6 756 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 C18orf12Q96KH6 178 aa13.03□□□□□ -0.32
UBAP1-202ENST00000359544 NXF5Q9H1B4 397 aaKnown RBP13.03□□□□□ -0.32
UBAP1-202ENST00000359544 FRG2CA6NGY1 282 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 ZNF705GA8MUZ8 300 aaPredicted RBP13.02□□□□□ -0.32
UBAP1-202ENST00000359544 HCRTR1O43613 425 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 FUT3P21217 361 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 G0S2P27469 103 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 CSNK1A1P48729 337 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 SP5Q6BEB4 398 aaPredicted RBP13.02□□□□□ -0.32
UBAP1-202ENST00000359544 DPPA3Q6W0C5 159 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 LANCL3Q6ZV70 420 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 LYZL2Q7Z4W2 148 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 LGI3Q8N145 548 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 FBXL14Q8N1E6 418 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 OR2C3Q8N628 320 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 OR5L2Q8NGL0 311 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 CLDND2Q8NHS1 167 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 C11orf40Q8WZ69 217 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 HAS2Q92819 552 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 GNPNAT1Q96EK6 184 aaPredicted RBP13.02□□□□□ -0.32
UBAP1-202ENST00000359544 CYYR1Q96J86 154 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 KCNK17Q96T54 332 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 HIPK2Q9H2X6 1198 aa13.02□□□□□ -0.32
UBAP1-202ENST00000359544 GEMIN2O14893 280 aaKnown RBP13.02□□□□□ -0.33
UBAP1-202ENST00000359544 HLA-DOBP13765 273 aa13.02□□□□□ -0.33
UBAP1-202ENST00000359544 PNLIPP16233 465 aa13.02□□□□□ -0.33
UBAP1-202ENST00000359544 HSD17B7P56937 341 aa13.02□□□□□ -0.33
UBAP1-202ENST00000359544 DEFB110Q30KQ9 67 aa13.02□□□□□ -0.33
UBAP1-202ENST00000359544 NAXEQ8NCW5 288 aa13.02□□□□□ -0.33
UBAP1-202ENST00000359544 OR52M1Q8NGK5 317 aa13.02□□□□□ -0.33
UBAP1-202ENST00000359544 RTN4IP1Q8WWV3 396 aaPredicted RBP13.02□□□□□ -0.33
UBAP1-202ENST00000359544 DNASE2BQ8WZ79 361 aa13.02□□□□□ -0.33
UBAP1-202ENST00000359544 FAM131CQ96AQ9 280 aa13.02□□□□□ -0.33
UBAP1-202ENST00000359544 ABHD14AQ9BUJ0 271 aa13.02□□□□□ -0.33
UBAP1-202ENST00000359544 HSF4Q9ULV5 492 aa13.02□□□□□ -0.33
UBAP1-202ENST00000359544 TNRC6BQ9UPQ9 1833 aaKnown RBP13.02□□□□□ -0.33
UBAP1-202ENST00000359544 A0A1B0GU03 582 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 A0A1W2PPC4 97 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 A0A1W2PQD3 144 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 MARCH11A6NNE9 402 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 C17orf105B2RV13 164 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 M0R143 59 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 ZNF728P0DKX0 622 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 IL12BP29460 328 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 ALDH3B1P43353 468 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 ZP4Q12836 540 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 NFATC4Q14934 902 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 SP6Q3SY56 376 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 OR10A7Q8NGE5 316 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 ADGRG7Q96K78 797 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 TM2D1Q9BX74 207 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 CTDSP1Q9GZU7 261 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 TMEM131Q92545 1883 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 NPIPB13A6NJU9 1138 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 DHRS7CA6NNS2 312 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 ZNF732B4DXR9 585 aa13.01□□□□□ -0.33
UBAP1-202ENST00000359544 NPIPB4C9JG80 1138 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms