RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 ARL6IP1Q15041 203 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 PIGYQ3MUY2 71 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 SLC22A25Q6T423 547 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 SPNS3Q6ZMD2 512 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 MEX3BQ6ZN04 569 aaKnown RBP9.45□□□□□ -0.9
RPE-202ENST00000359429 HIST2H3AQ71DI3 136 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 SUMF1Q8NBK3 374 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 OR4D5Q8NGN0 318 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 Q8WTZ3 238 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 TMEM171Q8WVE6 324 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 NABP1Q96AH0 204 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 ZNF837Q96EG3 531 aaPredicted RBP9.45□□□□□ -0.9
RPE-202ENST00000359429 ZNF385AQ96PM9 386 aaKnown RBP9.45□□□□□ -0.9
RPE-202ENST00000359429 C11orf1Q9H5F2 150 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 METTL7AQ9H8H3 244 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 IGHV1OR15-9A0A0B4J2B8 117 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 A0A1B0GW64 132 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 IGSF23A1L1A6 192 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 RBFOX3A6NFN3 312 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 AQP7P3A6NL99 342 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 ZNF724A8MTY0 619 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 M0R135 149 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 HSD17B6O14756 317 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 TIAF1O95411 115 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 SLC34A2O95436 690 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 ONECUT2O95948 504 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 ZNF133P52736 654 aaPredicted RBP9.45□□□□□ -0.9
RPE-202ENST00000359429 ELOBQ15370 118 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 SHHQ15465 462 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 GFI1BQ5VTD9 330 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 RTL6Q6ICC9 239 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 OR2M3Q8NG83 312 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 OR2G3Q8NGZ4 309 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 NTNG2Q96CW9 530 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 ZNF799Q96GE5 643 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 SUCNR1Q9BXA5 334 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 LIPGQ9Y5X9 500 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 HS3ST3B1Q9Y662 390 aa9.45□□□□□ -0.9
RPE-202ENST00000359429 IGKV1-12A0A0C4DH73 117 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 NKX2-6A6NCS4 301 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 GATCO43716 136 aaKnown RBP9.44□□□□□ -0.9
RPE-202ENST00000359429 IGKV1D-12P01611 117 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 KLK3P07288 261 aaPredicted RBP9.44□□□□□ -0.9
RPE-202ENST00000359429 HEXBP07686 556 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 MSR1P21757 451 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 OTX1P32242 354 aaPredicted RBP9.44□□□□□ -0.9
RPE-202ENST00000359429 GPX4P36969 197 aaPredicted RBP9.44□□□□□ -0.9
RPE-202ENST00000359429 LSM6P62312 80 aaKnown RBP9.44□□□□□ -0.9
RPE-202ENST00000359429 EIF3IQ13347 325 aaKnown RBP9.44□□□□□ -0.9
RPE-202ENST00000359429 HIKESHIQ53FT3 197 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 FBXL14Q8N1E6 418 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 ZNF383Q8NA42 475 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 GJC3Q8NFK1 279 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 OR10AD1Q8NGE0 317 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 GPHA2Q96T91 129 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 NELFAQ9H3P2 528 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 NOSIPQ9Y314 301 aaKnown RBP9.44□□□□□ -0.9
RPE-202ENST00000359429 UNC13CQ8NB66 2214 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 TGIF2-C20orf24A0A0A6YYL0 155 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 YKT6O15498 198 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 CD63P08962 238 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 SRP19P09132 144 aaKnown RBP9.44□□□□□ -0.9
RPE-202ENST00000359429 EPHA1P21709 976 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 TAGLN2P37802 199 aaKnown RBP9.44□□□□□ -0.9
RPE-202ENST00000359429 RSU1Q15404 277 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 PRAMEF20Q5VT98 475 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 Q6ZSR3 168 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 ODF3L1Q8IXM7 274 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 LGI3Q8N145 548 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 OR2C3Q8N628 320 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 PFDN5Q99471 154 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 METTL9Q9H1A3 318 aa9.44□□□□□ -0.9
RPE-202ENST00000359429 SHANK1Q9Y566 2161 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 IGLV3-32A0A0A0MS00 114 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 CCDC85CA6NKD9 419 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 SLC33A1O00400 549 aaPredicted RBP9.43□□□□□ -0.9
RPE-202ENST00000359429 AADACP22760 399 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 MSX1P28360 303 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 AFF3P51826 1226 aaKnown RBP9.43□□□□□ -0.9
RPE-202ENST00000359429 DLK1P80370 383 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 ZNF674Q2M3X9 581 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 PDZD11Q5EBL8 140 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 SP5Q6BEB4 398 aaPredicted RBP9.43□□□□□ -0.9
RPE-202ENST00000359429 PLXDC1Q8IUK5 500 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 BATF2Q8N1L9 274 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 CYB561D1Q8N8Q1 229 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 LFNGQ8NES3 379 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 UCN2Q96RP3 112 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 RBM24Q9BX46 236 aaKnown RBP9.43□□□□□ -0.9
RPE-202ENST00000359429 KRTAP3-3Q9BYR6 98 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 KRTAP3-2Q9BYR7 98 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 MAGT1Q9H0U3 335 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 GLRX2Q9NS18 164 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 PLEK2Q9NYT0 353 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 TREM2Q9NZC2 230 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 MYOTQ9UBF9 498 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 CCDC163A0A0D9SF12 145 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 PROB1E7EW31 1015 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 WRBO00258 174 aa9.43□□□□□ -0.9
RPE-202ENST00000359429 HIST1H2BKO60814 126 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms