RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ZNF391Q9UJN7 358 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 FAM96BQ9Y3D0 163 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 E9PLN8 166 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 SIRPB1O00241 398 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 NTN3O00634 580 aaPredicted RBP9.73□□□□□ -0.85
SSU72-202ENST00000359060 DEGS1O15121 323 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 CA6P23280 308 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 NKX2-1P43699 371 aaPredicted RBP9.73□□□□□ -0.85
SSU72-202ENST00000359060 AADACL3Q5VUY0 350 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 ZIC4Q8N9L1 334 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 DEPPQ9NTK1 212 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 FOXJ2Q9P0K8 574 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 FREM1Q5H8C1 2179 aa9.73□□□□□ -0.85
SSU72-202ENST00000359060 POLEQ07864 2286 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 LNP1A1A4G5 178 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 P2RY4P51582 365 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 SIGLEC12Q96PQ1 595 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 WNT5BQ9H1J7 359 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 RPS10P5Q9NQ39 176 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 KCNIP1Q9NZI2 227 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 LUZP4Q9P127 313 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 SHANK1Q9Y566 2161 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 TRGV5A0A0B4J1U4 118 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 KIR2DS1A0A191URI9 304 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 MEX3AA1L020 520 aaKnown RBP9.72□□□□□ -0.85
SSU72-202ENST00000359060 OR6C65A6NJZ3 312 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 M0R296 226 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 JTBO76095 146 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 CTSDP07339 412 aaPredicted RBP9.72□□□□□ -0.85
SSU72-202ENST00000359060 KIR2DS4P43632 304 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 RBM39Q14498 530 aaKnown RBP9.72□□□□□ -0.85
SSU72-202ENST00000359060 KIR2DS1Q14954 304 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 TGIF1Q15583 401 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 LYZL2Q7Z4W2 148 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 TMEM251Q8N6I4 163 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 PIK3IP1Q96FE7 263 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 TTTY12Q9BZ98 90 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 NAA60Q9H7X0 242 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 PNRC2Q9NPJ4 139 aaKnown RBP9.72□□□□□ -0.85
SSU72-202ENST00000359060 FBXL17Q9UF56 701 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 SPEGQ15772 3267 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 LINC01387J3KSC0 135 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 SNAPINO95295 136 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 CD8AP01732 235 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 SNRNP70P08621 437 aaKnown RBP9.72□□□□□ -0.85
SSU72-202ENST00000359060 MECP2P51608 486 aaKnown RBP9.72□□□□□ -0.85
SSU72-202ENST00000359060 ZNF345Q14585 488 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 LTC4SQ16873 150 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 TBC1D28Q2M2D7 210 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 HIKESHIQ53FT3 197 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 OR10AD1Q8NGE0 317 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 SCGB1C1Q8TD33 95 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 UFSP2Q9NUQ7 469 aa9.72□□□□□ -0.85
SSU72-202ENST00000359060 DIDO1Q9BTC0 2240 aaKnown RBP9.72□□□□□ -0.85
SSU72-202ENST00000359060 MFSD2BA6NFX1 497 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 E5RGE8 158 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 ATP6V1G2-DDX39BF2Z307 99 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 G3V3Q6 166 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 IFNA5P01569 189 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 FCGR3AP08637 254 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 AADACP22760 399 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 H3F3AP84243 136 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 ATP1A1-AS1Q5TC04 95 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 RPUSD3Q6P087 351 aaKnown RBP9.71□□□□□ -0.85
SSU72-202ENST00000359060 OVCH2Q7RTZ1 564 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 OR11L1Q8NGX0 322 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 PHYHIPLQ96FC7 376 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 Q96M66 194 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 ZNF488Q96MN9 340 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 SLC2A9Q9NRM0 540 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 LHX6Q9UPM6 363 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 NSG2Q9Y328 171 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 STARD10Q9Y365 291 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 PCNX1Q96RV3 2341 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 BCL3P20749 454 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 PTGER4P35408 488 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 CSRP2Q16527 193 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 KRBOX4Q5JUW0 171 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 OR10J5Q8NHC4 309 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 KIRREL1Q96J84 757 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 TRIB1Q96RU8 372 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 GPHA2Q96T91 129 aa9.71□□□□□ -0.85
SSU72-202ENST00000359060 MYOZ1Q9NP98 299 aaPredicted RBP9.71□□□□□ -0.85
SSU72-202ENST00000359060 TRAV39A0A0B4J263 110 aa9.71□□□□□ -0.86
SSU72-202ENST00000359060 CD300LBA8K4G0 201 aa9.71□□□□□ -0.86
SSU72-202ENST00000359060 TAAR5O14804 337 aa9.71□□□□□ -0.86
SSU72-202ENST00000359060 SSSCA1O60232 199 aa9.71□□□□□ -0.86
SSU72-202ENST00000359060 WDR1O75083 606 aa9.71□□□□□ -0.86
SSU72-202ENST00000359060 RCC1P18754 421 aaPredicted RBP9.71□□□□□ -0.86
SSU72-202ENST00000359060 CALCRP30988 508 aa9.71□□□□□ -0.86
SSU72-202ENST00000359060 NPBWR2P48146 333 aa9.71□□□□□ -0.86
SSU72-202ENST00000359060 TMEM33P57088 247 aa9.71□□□□□ -0.86
SSU72-202ENST00000359060 FAM3AP98173 230 aa9.71□□□□□ -0.86
SSU72-202ENST00000359060 DHODHQ02127 395 aa9.71□□□□□ -0.86
SSU72-202ENST00000359060 SURF2Q15527 256 aaPredicted RBP9.71□□□□□ -0.86
SSU72-202ENST00000359060 TSC22D1Q15714 1073 aa9.71□□□□□ -0.86
SSU72-202ENST00000359060 AKR1C8PQ5T2L2 129 aa9.71□□□□□ -0.86
SSU72-202ENST00000359060 ZNF573Q86YE8 665 aa9.71□□□□□ -0.86
SSU72-202ENST00000359060 STPG2Q8N412 459 aa9.71□□□□□ -0.86
SSU72-202ENST00000359060 SHARPINQ9H0F6 387 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms