RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 OR2J1Q9GZK6 312 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 RNF208Q9H0X6 261 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 SLC45A2Q9UMX9 530 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 APCSP02743 223 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 HERPUD1Q15011 391 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 TMEM97Q5BJF2 176 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 SAMD13Q5VXD3 122 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 LHFPL2Q6ZUX7 228 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 MTCH2Q9Y6C9 303 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 PTGER4P35408 488 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 MICBQ29980 383 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 OR52N5Q8NH56 324 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 AUP1Q9Y679 476 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 HTR5AP47898 357 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 NTHL1P78549 312 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 ANKRD17O75179 2603 aaKnown RBP5.42□□□□□ -1.54
VPS13B-203ENST00000358544 PRAMEF25A6NGN4 478 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF891A8MT65 544 aaPredicted RBP5.42□□□□□ -1.54
VPS13B-203ENST00000358544 IDSB3KWA1 339 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 HLA-GP17693 338 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 CCR2P41597 374 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 HNRNPA1L2Q32P51 320 aaKnown RBP5.42□□□□□ -1.54
VPS13B-203ENST00000358544 PRAMEF5Q5TYX0 476 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 PRAMEF6Q5VXH4 476 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 RPS4Y2Q8TD47 263 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 OR2A5Q96R48 311 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 PDFQ9HBH1 243 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 EIF4E2O60573 245 aaKnown RBP5.42□□□□□ -1.54
VPS13B-203ENST00000358544 FUT3P21217 361 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 MMP16P51512 607 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 RIPPLY2Q5TAB7 128 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 SPSB2Q99619 263 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 TINAGQ9UJW2 476 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 PPP1R3CQ9UQK1 317 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 CDC14CA4D256 554 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 DHRS7CA6NNS2 312 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 RPS23P62266 143 aaKnown RBP5.42□□□□□ -1.54
VPS13B-203ENST00000358544 PPP2CBP62714 309 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 RAC1P63000 192 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 PPP2CAP67775 309 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 PLPPR5Q32ZL2 321 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 OR5AC2Q9NZP5 309 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 LRP12Q9Y561 859 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 DUX1O43812 170 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 FHITP49789 147 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 THEM4Q5T1C6 240 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 KLHDC7BQ96G42 594 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 RARRES2Q99969 163 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 OR51B6Q9H340 312 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 APOBEC3BQ9UH17 382 aaKnown RBP5.42□□□□□ -1.54
VPS13B-203ENST00000358544 VAX2Q9UIW0 290 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 MMACHCQ9Y4U1 282 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 SIGLEC1Q9BZZ2 1709 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 RELQ04864 619 aaPredicted RBP5.42□□□□□ -1.54
VPS13B-203ENST00000358544 ARIH2OSQ8N7S6 290 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 GTF3AQ92664 365 aaKnown RBP5.42□□□□□ -1.54
VPS13B-203ENST00000358544 CACNG5Q9UF02 275 aa5.42□□□□□ -1.54
VPS13B-203ENST00000358544 MRPS2Q9Y399 296 aaKnown RBP5.42□□□□□ -1.54
VPS13B-203ENST00000358544 PHIPQ8WWQ0 1821 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 C5orf52A6NGY3 159 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 OR4C45A6NMZ5 311 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 DEGS1O15121 323 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 ID4P47928 161 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 HOGA1Q86XE5 327 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 SLC35E1Q96K37 410 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 SPINT2O43291 252 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 GJA4P35212 333 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 NHLH1Q02575 133 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 TMEM25Q86YD3 366 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 BLNKQ8WV28 456 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 GALNT14Q96FL9 552 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 LRFN3Q9BTN0 628 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 ULBP2Q9BZM5 246 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 MARCH11A6NNE9 402 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 GYPAP02724 150 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 TMEM255AQ5JRV8 349 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF506Q5JVG8 444 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 LRRC18Q8N456 261 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 ADAD2Q8NCV1 583 aaKnown RBP5.41□□□□□ -1.54
VPS13B-203ENST00000358544 TSPAN32Q96QS1 320 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 TBX21Q9UL17 535 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 NKX2-6A6NCS4 301 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 TCN2P20062 427 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 MRGPREQ86SM8 312 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 ALG14Q96F25 216 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 SPRY1O43609 319 aaPredicted RBP5.41□□□□□ -1.54
VPS13B-203ENST00000358544 CD8AP01732 235 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 CLEC3BP05452 202 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 HTR1DP28221 377 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 YBX1P67809 324 aaKnown RBP5.41□□□□□ -1.54
VPS13B-203ENST00000358544 GABRA6Q16445 453 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF770Q6IQ21 691 aaPredicted RBP5.41□□□□□ -1.54
VPS13B-203ENST00000358544 C19orf48Q6RUI8 117 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF595Q8IYB9 648 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 ERGIC1Q969X5 290 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 NPDC1Q9NQX5 325 aaPredicted RBP5.41□□□□□ -1.54
VPS13B-203ENST00000358544 DNAJB12Q9NXW2 375 aaKnown RBP5.41□□□□□ -1.54
VPS13B-203ENST00000358544 LINC01553A4QN01 128 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 MOSPD3O75425 235 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 ZBTB25P24278 435 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms