RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 IGHV3-72A0A0B4J1Y9 119 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 GAGE10A6NGK3 116 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 AKR7A2O43488 359 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 ADRA2AP08913 450 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 DSCR4P56555 118 aaPredicted RBP8.71□□□□□ -1.02
CHD3-202ENST00000358181 MLLT11Q13015 90 aaPredicted RBP8.71□□□□□ -1.02
CHD3-202ENST00000358181 CALHM1Q8IU99 346 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 ZBTB44Q8NCP5 570 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 OR2D3Q8NGH3 330 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 APOBEC4Q8WW27 367 aaKnown RBP8.71□□□□□ -1.02
CHD3-202ENST00000358181 TMEM204Q9BSN7 226 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 CXXC4Q9H2H0 198 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 DNAJB12Q9NXW2 375 aaKnown RBP8.71□□□□□ -1.02
CHD3-202ENST00000358181 LGALS3P17931 250 aaKnown RBP8.71□□□□□ -1.02
CHD3-202ENST00000358181 PJVKQ0ZLH3 352 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 MMDQ15546 238 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 MRGPREQ86SM8 312 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 OR5H6Q8NGV6 325 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 ELSPBP1Q96BH3 223 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 KLK11Q9UBX7 282 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 ITGB4P16144 1822 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 CD14P08571 375 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 SDHAP31040 664 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 FZD5Q13467 585 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 SSX8Q7RTT4 187 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 MDP1Q86V88 176 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 LYSMD2Q8IV50 215 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 OR13G1Q8NGZ3 307 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 FOXB1Q99853 325 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 IGHV3-66A0A0C4DH42 116 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 TMEM238LA0A1B0GVL6 79 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 A6NJY4 79 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 DNAL4O96015 105 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 PSMB1P20618 241 aaKnown RBP8.71□□□□□ -1.02
CHD3-202ENST00000358181 ARRB2P32121 409 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 DLX6P56179 175 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 PMS2P11Q13670 270 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 C11orf44Q8N8P7 122 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 OR1L6Q8NGR2 347 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 EXTL1Q92935 676 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 HDAC8Q9BY41 377 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 GPR35Q9HC97 309 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 DCAF13Q9NV06 445 aaKnown RBP8.71□□□□□ -1.02
CHD3-202ENST00000358181 OCIAD1Q9NX40 245 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 C1RLQ9NZP8 487 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 ERRFI1Q9UJM3 462 aaPredicted RBP8.71□□□□□ -1.02
CHD3-202ENST00000358181 ETV7Q9Y603 341 aa8.71□□□□□ -1.02
CHD3-202ENST00000358181 COL8A1P27658 744 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 TMEM95Q3KNT9 176 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 PHLDA1Q8WV24 401 aaPredicted RBP8.7□□□□□ -1.02
CHD3-202ENST00000358181 ASB5Q8WWX0 329 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 POM121BA6NF01 834 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 NKX2-2O95096 273 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 HLXQ14774 488 aaPredicted RBP8.7□□□□□ -1.02
CHD3-202ENST00000358181 CLPPQ16740 277 aaPredicted RBP8.7□□□□□ -1.02
CHD3-202ENST00000358181 DHRS4L2Q6PKH6 230 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.7□□□□□ -1.02
CHD3-202ENST00000358181 PRRT4C9JH25 899 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 LANCL1O43813 399 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 LHBP01229 141 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 THY1P04216 161 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 HIST1H1CP16403 213 aaKnown RBP8.7□□□□□ -1.02
CHD3-202ENST00000358181 EFNB1P98172 346 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 DUSP5Q16690 384 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 FAM78BQ5VT40 261 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 PHIPQ8WWQ0 1821 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 IGHV3-23P01764 117 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 IL4P05112 153 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 PATE4P0C8F1 98 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 STARD6P59095 220 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 TOMM34Q15785 309 aaPredicted RBP8.7□□□□□ -1.02
CHD3-202ENST00000358181 LHFPL5Q8TAF8 219 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 MYEOVQ96EZ4 313 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 SRFP11831 508 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 KIR2DS2P43631 304 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 TMEM240Q5SV17 173 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 GPX8Q8TED1 209 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 APOBEC3DQ96AK3 386 aaPredicted RBP8.7□□□□□ -1.02
CHD3-202ENST00000358181 NTNG2Q96CW9 530 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 CXorf36Q9H7Y0 433 aa8.7□□□□□ -1.02
CHD3-202ENST00000358181 DIMT1Q9UNQ2 313 aaKnown RBP8.7□□□□□ -1.02
CHD3-202ENST00000358181 LRRC37A3O60309 1634 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 MASP2O00187 686 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 NID1P14543 1247 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 S100A11P31949 105 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 C3orf36Q3SXR2 165 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 MUC20Q8N307 709 aaPredicted RBP8.69□□□□□ -1.02
CHD3-202ENST00000358181 CLMPQ9H6B4 373 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 CHST2Q9Y4C5 530 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 C9JCJ5 164 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 TGFAP01135 160 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 SAA1P0DJI8 122 aaPredicted RBP8.69□□□□□ -1.02
CHD3-202ENST00000358181 FUT6P51993 359 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 GABRA6Q16445 453 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 NOXO1Q8NFA2 376 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 OR4X1Q8NH49 305 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 CSNK1G1Q9HCP0 422 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 TRIP11Q15643 1979 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 FUCA1P04066 466 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 GCAP28676 217 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms