RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 OR52N4Q8NGI2 321 aa6.82□□□□□ -1.32
COL4A3BP-202ENST00000357457 NDNFQ8TB73 568 aa6.82□□□□□ -1.32
COL4A3BP-202ENST00000357457 ASB17Q8WXJ9 295 aa6.82□□□□□ -1.32
COL4A3BP-202ENST00000357457 CLEC7AQ9BXN2 247 aa6.82□□□□□ -1.32
COL4A3BP-202ENST00000357457 GPR173Q9NS66 373 aa6.82□□□□□ -1.32
COL4A3BP-202ENST00000357457 ARL8BQ9NVJ2 186 aa6.82□□□□□ -1.32
COL4A3BP-202ENST00000357457 NDE1Q9NXR1 346 aa6.82□□□□□ -1.32
COL4A3BP-202ENST00000357457 DPM3Q9P2X0 92 aa6.82□□□□□ -1.32
COL4A3BP-202ENST00000357457 TAGLN3Q9UI15 199 aa6.82□□□□□ -1.32
COL4A3BP-202ENST00000357457 COPS3Q9UNS2 423 aa6.82□□□□□ -1.32
COL4A3BP-202ENST00000357457 TMEM14AQ9Y6G1 99 aa6.82□□□□□ -1.32
COL4A3BP-202ENST00000357457 STARD9Q9P2P6 4700 aa6.82□□□□□ -1.32
COL4A3BP-202ENST00000357457 TENM2Q9NT68 2774 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 IGKV1-27A0A075B6S5 117 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 CCDC182A6NF36 153 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 DNAJC8O75937 253 aaPredicted RBP6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 IGLV1-47P01700 117 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 OSMP13725 252 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 CCL1P22362 96 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 CD24P25063 80 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 PEX2P28328 305 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 CD34P28906 385 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 BRS3P32247 399 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 MS4A2Q01362 244 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 MFGE8Q08431 387 aaPredicted RBP6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 APOFQ13790 326 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 TRIM25Q14258 630 aaKnown RBP6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 FAM98BQ52LJ0 330 aaKnown RBP6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 RNF144BQ7Z419 303 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 TMEM179BQ7Z7N9 219 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 RTN4RL2Q86UN3 420 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 BATF2Q8N1L9 274 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 OSR2Q8N2R0 312 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 DPF1Q92782 380 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 STMN2Q93045 179 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 CEP19Q96LK0 163 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 SLC25A33Q9BSK2 321 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 MCRIP2Q9BUT9 160 aaKnown RBP6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 MOB1AQ9H8S9 216 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 ZNF446Q9NWS9 450 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 OR52A1Q9UKL2 312 aa6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 UBE2J1Q9Y385 318 aaPredicted RBP6.81□□□□□ -1.32
COL4A3BP-202ENST00000357457 FAM90A18PA6NE21 464 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 FAM90A16PA6NEW6 464 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 FAM90A20PA6NIJ5 464 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 A6NIN4 97 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 FAM90A9PA6NNJ1 464 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 FAM90A12PA8MX19 464 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 FAM90A5PA8MXJ8 464 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 LEUTXA8MZ59 168 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 LY6LH3BQJ8 138 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 M0QZK8 103 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 PSPNO60542 156 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 IGHA1P01876 353 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 FAM90A15PP0C7V4 464 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 FAM90A13PP0C7W8 464 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 FAM90A14PP0C7W9 464 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 FAM90A24PP0C7X0 464 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 RAP2AP10114 183 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 SLC6A1P30531 599 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 FUT6P51993 359 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 ACTR3P61158 418 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 RPS7P62081 194 aaKnown RBP6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 ZNF146Q15072 292 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 UBE2V2Q15819 145 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 HEPN1Q6WQI6 88 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 DHFR2Q86XF0 187 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 ARHGAP24Q8N264 748 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 ABHD12Q8N2K0 398 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 TPRX1Q8N7U7 411 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 OR51D1Q8NGF3 324 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 ZNF596Q8TC21 504 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 CORO2AQ92828 525 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 P2RX4Q99571 388 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 CADM1Q9BY67 442 aaKnown RBP6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 SLC25A19Q9HC21 320 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 ZFP57Q9NU63 452 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 ZMAT5Q9UDW3 170 aaKnown RBP6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 LSM4Q9Y4Z0 139 aaKnown RBP6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 SNX5Q9Y5X3 404 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 R4GMQ9 66 aa6.8□□□□□ -1.32
COL4A3BP-202ENST00000357457 PLECQ15149 4684 aaKnown RBP6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 PSMB11A5LHX3 300 aa6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 LOC110117498-PIK3R3F6TDL0 507 aa6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 H0YHG0 523 aa6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 C3orf84H3BNL1 204 aa6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 MGST3O14880 152 aa6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 RAMP3O60896 148 aa6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 ZFPL1O95159 310 aa6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 HAND1O96004 215 aa6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 CST1P01037 141 aa6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 MRPL3P09001 348 aaKnown RBP6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 MYCNOSP40205 109 aa6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 ESRRGP62508 458 aa6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 RPL23AP62750 156 aaKnown RBP6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 ZNF91Q05481 1191 aa6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 EDDM3AQ14507 147 aa6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 GRK1Q15835 563 aa6.79□□□□□ -1.32
COL4A3BP-202ENST00000357457 SNAPC1Q16533 368 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms