RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 SPNS3Q6ZMD2 512 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 OR1B1Q8NGR6 318 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 HMGCLL1Q8TB92 370 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 R3HDM4Q96D70 268 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 ANGPTL4Q9BY76 406 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 TMEM191AQ9H0A3 160 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 NARFLQ9H6Q4 476 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 ZNF665Q9H7R5 613 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 NPTNQ9Y639 398 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 KCNE3Q9Y6H6 103 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 PLCH1Q4KWH8 1693 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 CBY3A6NI87 242 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 KIAA1324LA8MWY0 1029 aaPredicted RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 B4DEV8 164 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 PTBP3O95758 552 aaKnown RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 OPN1MWP04001 364 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 OPN1MW2P0DN77 364 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 OPN1MW3P0DN78 364 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 KIR2DL1P43626 348 aaPredicted RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 KIR2DL2P43627 348 aaPredicted RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 PCBP3P57721 371 aaKnown RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 RAE1P78406 368 aaKnown RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 FOXO1Q12778 655 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 FAM74A3Q4VXF1 159 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 KHDC3LQ587J8 217 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 CCDC144NLQ6NUI1 221 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 WDR74Q6RFH5 385 aaPredicted RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 C5orf17Q8NAS9 161 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 OR4A4PQ8NGN8 299 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 Q8WTZ3 238 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 NUDT8Q8WV74 236 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 ASB5Q8WWX0 329 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 C12orf57Q99622 126 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 ZNF768Q9H5H4 540 aaKnown RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 RNF7Q9UBF6 113 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 RGPD2P0DJD1 1756 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 CTDSPLO15194 276 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 RER1O15258 196 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 GNG7O60262 68 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 CA11O75493 328 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 YBX1P67809 324 aaKnown RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 RHBDD2Q6NTF9 364 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 DHRS13Q6UX07 377 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 GNRHR2Q96P88 292 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 FAAP24Q9BTP7 215 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 CLEC5AQ9NY25 188 aa5.74□□□□□ -1.49
UPF2-201ENST00000356352 ZMAT5Q9UDW3 170 aaKnown RBP5.74□□□□□ -1.49
UPF2-201ENST00000356352 FABP4P15090 132 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 GZMHP20718 246 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 AVPR2P30518 371 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 PSMB2P49721 201 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 SLC37A1P57057 533 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 PRSS42Q7Z5A4 293 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 OR1L6Q8NGR2 347 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 MRGPRDQ8TDS7 321 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 CT55Q8WUE5 264 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 APOBEC4Q8WW27 367 aaKnown RBP5.73□□□□□ -1.49
UPF2-201ENST00000356352 SIRT3Q9NTG7 399 aaPredicted RBP5.73□□□□□ -1.49
UPF2-201ENST00000356352 CES1P1Q9UKY3 287 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 IGHV1OR15-9A0A0B4J2B8 117 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 HMSDA8MTL9 139 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 PHOX2AO14813 284 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 PPM1DO15297 605 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 ITGBL1O95965 494 aaPredicted RBP5.73□□□□□ -1.49
UPF2-201ENST00000356352 OR3A1P47881 315 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 DHRS2Q13268 280 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 ELOBQ15370 118 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 HES3Q5TGS1 186 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 ZNF770Q6IQ21 691 aaPredicted RBP5.73□□□□□ -1.49
UPF2-201ENST00000356352 ZNF793Q6ZN11 406 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 Q6ZS52 159 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 TUSC5Q8IXB3 177 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 DYNLRB2Q8TF09 96 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 ADIPOR1Q96A54 375 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 MAP1LC3CQ9BXW4 147 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 LHX9Q9NQ69 397 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 UFC1Q9Y3C8 167 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 BMPR1BO00238 502 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 PDE6DO43924 150 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 HAND1O96004 215 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 CSF2RBP32927 897 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 PPOXP50336 477 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 C21orf58P58505 322 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 HLA-DRB3P79483 266 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 FMODQ06828 376 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 PPP1R1AQ13522 171 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 PRSS36Q5K4E3 855 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 UBALD1Q8TB05 177 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 MS4A10Q96PG2 267 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 BET1LQ9NYM9 111 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 PIPOXQ9P0Z9 390 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 IGHV5-51A0A0C4DH38 117 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 SHISA8B8ZZ34 492 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 EDIL3O43854 480 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 LYZL6O75951 148 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 P01737 135 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 ORM2P19652 201 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 CLEC12BQ2HXU8 276 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 MPV17LQ2QL34 196 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms