RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ARHGAP21Q5T5U3 1957 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 IGKV1-27A0A075B6S5 117 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 IGSF23A1L1A6 192 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 HSPB6O14558 160 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 SOD3P08294 240 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 EN2P19622 333 aaPredicted RBP8.82□□□□□ -1
PTPRA-203ENST00000356147 HOXA5P20719 270 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 EPHA1P21709 976 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 DLK1P80370 383 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 TMEM123Q8N131 208 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 NAT6Q93015 286 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 SMOC1Q9H4F8 434 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 GAR1Q9NY12 217 aaKnown RBP8.82□□□□□ -1
PTPRA-203ENST00000356147 CLEC1BQ9P126 229 aa8.82□□□□□ -1
PTPRA-203ENST00000356147 RBFOX3A6NFN3 312 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 SHISA7A6NL88 538 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 K7N7A8 449 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 DHRS3O75911 302 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 SLC34A2O95436 690 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 AFF3P51826 1226 aaKnown RBP8.81□□□□□ -1
PTPRA-203ENST00000356147 GAMTQ14353 236 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 PPA1Q15181 289 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 SPIN3Q5JUX0 258 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 MYPOPQ86VE0 399 aaPredicted RBP8.81□□□□□ -1
PTPRA-203ENST00000356147 HAS2Q92819 552 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 P4HTMQ9NXG6 502 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 A0A1B0GX78 115 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 HIST1H2BKO60814 126 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 HIST1H2BJP06899 126 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 FABP4P15090 132 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 HIST1H2BOP23527 126 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 HIST1H2BBP33778 126 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 GUCA1AP43080 201 aaPredicted RBP8.81□□□□□ -1
PTPRA-203ENST00000356147 HIST1H2BDP58876 126 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 HIST1H2BCP62807 126 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 ELOBQ15370 118 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 SURF2Q15527 256 aaPredicted RBP8.81□□□□□ -1
PTPRA-203ENST00000356147 HIST2H2BEQ16778 126 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 IZUMO4Q1ZYL8 232 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.81□□□□□ -1
PTPRA-203ENST00000356147 LIAT1Q6ZQX7 453 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 FBXL14Q8N1E6 418 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 OIT3Q8WWZ8 545 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 SLC39A7Q92504 469 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 HIST1H2BHQ93079 126 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 Q96M66 194 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 HIST1H2BNQ99877 126 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 HIST1H2BMQ99879 126 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 ARV1Q9H2C2 271 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 AKIRIN1Q9H9L7 192 aaPredicted RBP8.81□□□□□ -1
PTPRA-203ENST00000356147 ATG2AQ2TAZ0 1938 aa8.81□□□□□ -1
PTPRA-203ENST00000356147 LILRA5A6NI73 299 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 ZNF729A6NN14 1252 aaPredicted RBP8.8□□□□□ -1
PTPRA-203ENST00000356147 M0R135 149 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 AADACP22760 399 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 DUSP1P28562 367 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 CDX1P47902 265 aaPredicted RBP8.8□□□□□ -1
PTPRA-203ENST00000356147 CLEC12BQ2HXU8 276 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 SPSB3Q6PJ21 355 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 Q6ZPA2 131 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 ZNF429Q86V71 674 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 OR5C1Q8NGR4 320 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 MSI2Q96DH6 328 aaKnown RBP8.8□□□□□ -1
PTPRA-203ENST00000356147 ZNF799Q96GE5 643 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 CHST5Q9GZS9 411 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 NECAP2Q9NVZ3 263 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 DMRT1Q9Y5R6 373 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 WRBO00258 174 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 CELA2AP08217 269 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 CD38P28907 300 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 GNMTQ14749 295 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 DMRTC2Q8IXT2 367 aaPredicted RBP8.8□□□□□ -1
PTPRA-203ENST00000356147 OR2C3Q8N628 320 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 ZNF610Q8N9Z0 462 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 OR10AD1Q8NGE0 317 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 GLRX2Q9NS18 164 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 NBEAQ8NFP9 2946 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 IGHV1OR21-1A0A087WYE8 117 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 IGKV1-12A0A0C4DH73 117 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 YKT6O15498 198 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 IGKV1D-12P01611 117 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 CCL1P22362 96 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 SHHQ15465 462 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 KHDC3LQ587J8 217 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 BOD1Q96IK1 185 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 YPEL4Q96NS1 127 aa8.8□□□□□ -1
PTPRA-203ENST00000356147 ESPL1Q14674 2120 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 A0A1W2PNV4 684 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 HSD17B6O14756 317 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 GDF9O60383 454 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 HLA-HP01893 362 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 DYNLT3P51808 116 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 UCP2P55851 309 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 ZNF154Q13106 437 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 ENDOGQ14249 297 aaKnown RBP8.79□□□□□ -1
PTPRA-203ENST00000356147 ANKRD37Q7Z713 158 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 OR6X1Q8NH79 312 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 C18orf12Q96KH6 178 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 TM2D1Q9BX74 207 aa8.79□□□□□ -1
PTPRA-203ENST00000356147 SUCNR1Q9BXA5 334 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms