RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 A0A096LPE4 126 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 A0A1W2PPZ6 126 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 OR4A47Q6IF82 309 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 OR4B1Q8NGF8 309 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 STARD10Q9Y365 291 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 CHST1O43916 411 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 CXCL13O43927 109 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 SRP14P37108 136 aaKnown RBP11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 TBC1D26Q86UD7 250 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 OR2A5Q96R48 311 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 RGPD5Q99666 1765 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 CAPZBP47756 277 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 LINC00696Q6ZRV3 163 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 EIF4E3Q8N5X7 224 aaKnown RBP11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 OR4F17Q8NGA8 305 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 THOC3Q96J01 351 aaKnown RBP11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 MS4A4AQ96JQ5 239 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 FOXB1Q99853 325 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 PMS2P1A4D2B8 440 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 PPM1DO15297 605 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 CD27P26842 260 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 CDX1P47902 265 aaPredicted RBP11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 H1FOOQ8IZA3 346 aaPredicted RBP11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 ANKRD10Q9NXR5 420 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 PPIL1Q9Y3C6 166 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 SNURFLB1AK76 121 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 BRS3P32247 399 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 TMEM255AQ5JRV8 349 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 REC114Q7Z4M0 266 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 MRPL24Q96A35 216 aaKnown RBP11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 TECRQ9NZ01 308 aaKnown RBP11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 TNFSF11O14788 317 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 RHBDL1O75783 438 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 CD1AP06126 327 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 ZNF362Q5T0B9 420 aaPredicted RBP11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 LDLRAD3Q86YD5 345 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 HSF4Q9ULV5 492 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 MRPS2Q9Y399 296 aaKnown RBP11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 FMODQ06828 376 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 ZNF141Q15928 474 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 ISXQ2M1V0 245 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 KCNK15Q9H427 330 aa11.29□□□□□ -0.6
SYNCRIP-201ENST00000355238 LAMB1P07942 1786 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 NPIPB8E9PQR5 432 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 PITX3O75364 302 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 ZNF117Q03924 483 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 VMA21Q3ZAQ7 101 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 C16orf82Q7Z2V1 217 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 SRD5A3Q9H8P0 318 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 TRGV10A0A0A0MS01 117 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 IGHV3-15A0A0B4J1V0 119 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 IFITM10A6NMD0 228 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 NGFP01138 241 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 SP1P08047 785 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 NHLRC3Q5JS37 347 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 RSPO2Q6UXX9 243 aaPredicted RBP11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 ADAD2Q8NCV1 583 aaKnown RBP11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 ATOH1Q92858 354 aaPredicted RBP11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 PRR13Q9NZ81 148 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 OR1P1Q8NH06 330 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 MRPL30Q8TCC3 161 aaKnown RBP11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 RHOVQ96L33 236 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 CTXND1A0A1B0GTU2 59 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 TRGC2P03986 189 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 CEACAM5P06731 702 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 CEACAM16Q2WEN9 425 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 FBLIM1Q8WUP2 373 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 PTX4Q96A99 478 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 PARD6GQ9BYG4 376 aaPredicted RBP11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 OR2M5A3KFT3 312 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 C5orf52A6NGY3 159 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 APCSP02743 223 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 TCTN1Q2MV58 587 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 DDA1Q9BW61 102 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 LPAR5Q9H1C0 372 aa11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 METTL1Q9UBP6 276 aaKnown RBP11.28□□□□□ -0.6
SYNCRIP-201ENST00000355238 LOC105371267A0A1B0GV96 52 aa11.27□□□□□ -0.6
SYNCRIP-201ENST00000355238 CXorf65A6NEN9 183 aa11.27□□□□□ -0.6
SYNCRIP-201ENST00000355238 OR4C45A6NMZ5 311 aa11.27□□□□□ -0.6
SYNCRIP-201ENST00000355238 RER1O15258 196 aa11.27□□□□□ -0.6
SYNCRIP-201ENST00000355238 PRKNO60260 465 aaPredicted RBP11.27□□□□□ -0.6
SYNCRIP-201ENST00000355238 S100A4P26447 101 aaKnown RBP11.27□□□□□ -0.6
SYNCRIP-201ENST00000355238 ATP6V0CP27449 155 aa11.27□□□□□ -0.6
SYNCRIP-201ENST00000355238 MYBPHQ13203 477 aa11.27□□□□□ -0.6
SYNCRIP-201ENST00000355238 COL19A1Q14993 1142 aa11.27□□□□□ -0.6
SYNCRIP-201ENST00000355238 MICBQ29980 383 aa11.27□□□□□ -0.6
SYNCRIP-201ENST00000355238 PRICKLE4Q2TBC4 344 aa11.27□□□□□ -0.6
SYNCRIP-201ENST00000355238 C10orf35Q96D05 121 aa11.27□□□□□ -0.6
SYNCRIP-201ENST00000355238 VSIG4Q9Y279 399 aa11.27□□□□□ -0.6
SYNCRIP-201ENST00000355238 FER1L6Q2WGJ9 1857 aa11.27□□□□□ -0.6
SYNCRIP-201ENST00000355238 FCGR3BO75015 233 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 PRSS1P07477 247 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 VSIG10L2P0DP72 767 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 ACAA2P42765 397 aaKnown RBP11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 IER3P46695 156 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR1C1Q15619 314 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 AKAP11Q9UKA4 1901 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 PRRT4C9JH25 899 aa11.27□□□□□ -0.61
SYNCRIP-201ENST00000355238 CORTO00230 105 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 294.6 ms