RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 SLC38A6Q8IZM9 456 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 OR10AC1Q8NH08 325 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 ADAM19Q9H013 955 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 CNTD2Q9H8S5 307 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 EXOGQ9Y2C4 368 aaKnown RBP8.48□□□□□ -1.05
GABPA-201ENST00000354828 PCDHGA9Q9Y5G4 932 aaKnown RBP8.48□□□□□ -1.05
GABPA-201ENST00000354828 NKX2-6A6NCS4 301 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 TMEM200CA6NKL6 621 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 B9A039 149 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 DNASE2O00115 360 aaPredicted RBP8.48□□□□□ -1.05
GABPA-201ENST00000354828 SULT1C2O00338 296 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 SSSCA1O60232 199 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 ERVFRD-1P60508 538 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 AADACL4Q5VUY2 407 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 CCDC144NLQ6NUI1 221 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 Q6ZT83 130 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 C10orf111Q8N326 155 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 OR13C8Q8NGS7 320 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 SAT2Q96F10 170 aaPredicted RBP8.48□□□□□ -1.05
GABPA-201ENST00000354828 SLC35D1Q9NTN3 355 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 WIPI2Q9Y4P8 454 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 ZFHX2Q9C0A1 2572 aaPredicted RBP8.48□□□□□ -1.05
GABPA-201ENST00000354828 A0A0G2JMM0 328 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 A0A1W2PPB8 328 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 A0A1W2PRS3 328 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 ZNF320A2RRD8 509 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 KIR3DP1A8MWS1 328 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 ZG16O60844 167 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 HIST1H1DP16402 221 aaKnown RBP8.48□□□□□ -1.05
GABPA-201ENST00000354828 NKX2-5P52952 324 aaPredicted RBP8.48□□□□□ -1.05
GABPA-201ENST00000354828 LSM11P83369 360 aaKnown RBP eCLIP8.48□□□□□ -1.05
GABPA-201ENST00000354828 TLE4Q04727 773 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 ACSM6Q6P461 480 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 TMEM104Q8NE00 496 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 RSRP1Q9BUV0 290 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 C11orf54Q9H0W9 315 aaPredicted RBP8.48□□□□□ -1.05
GABPA-201ENST00000354828 LPAR3Q9UBY5 353 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 A0A1W2PNV4 684 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 XRCC3O43542 346 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 SIX6O95475 246 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 OPN1MWP04001 364 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 ASAH2BP0C7U1 165 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 OPN1MW2P0DN77 364 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 OPN1MW3P0DN78 364 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 BPIFB3P59826 476 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 SSTP61278 116 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 TESK1Q15569 626 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 PRSS53Q2L4Q9 553 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 DOLPP1Q86YN1 238 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 PRSS33Q8NF86 280 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 OR4S1Q8NGB4 309 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 C10orf35Q96D05 121 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 SNRNP40Q96DI7 357 aaKnown RBP8.48□□□□□ -1.05
GABPA-201ENST00000354828 MAGT1Q9H0U3 335 aa8.48□□□□□ -1.05
GABPA-201ENST00000354828 IGKV3D-11A0A0A0MRZ8 115 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 OOEPA6NGQ2 149 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 PLPP2O43688 288 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 ARG1P05089 322 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 LIMS3P0CW19 117 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 LIMS4P0CW20 117 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 GNLYP22749 145 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 APOBEC3AP31941 199 aaPredicted RBP8.47□□□□□ -1.05
GABPA-201ENST00000354828 PRDX2P32119 198 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 RPS4XP62701 263 aaKnown RBP8.47□□□□□ -1.05
GABPA-201ENST00000354828 GUCA2AQ02747 115 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 MPPED2Q15777 294 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 ACSF3Q4G176 576 aaPredicted RBP8.47□□□□□ -1.05
GABPA-201ENST00000354828 DEDD2Q8WXF8 326 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 HRH4Q9H3N8 390 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 SEMA7AO75326 666 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 APOC3P02656 99 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 HPNP05981 417 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 LIMK1P53667 647 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 SEBOXQ9HB31 216 aaPredicted RBP8.47□□□□□ -1.05
GABPA-201ENST00000354828 CA10Q9NS85 328 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 FAM212BQ9NTI7 297 aaPredicted RBP8.47□□□□□ -1.05
GABPA-201ENST00000354828 C17orf51A8MQB3 221 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 IL5P05113 134 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 PGA4P0DJD7 388 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 PGA3P0DJD8 388 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 OPRK1P41145 380 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 LPAR6P43657 344 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 TIMM23BQ5SRD1 257 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 FRZBQ92765 325 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 RNASE6Q93091 150 aaKnown RBP8.47□□□□□ -1.05
GABPA-201ENST00000354828 YAE1D1Q9NRH1 226 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 PSENENQ9NZ42 101 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 TMEM272A0A1B0GTI8 110 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 IFNL4K9M1U5 179 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 IFI6P09912 130 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 TGM1P22735 817 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 PTBP1P26599 531 aaKnown RBP eCLIP8.47□□□□□ -1.05
GABPA-201ENST00000354828 SSTR2P30874 369 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 SUCLG1P53597 346 aaKnown RBP8.47□□□□□ -1.05
GABPA-201ENST00000354828 MGAT2Q10469 447 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 ZXDCQ2QGD7 858 aaPredicted RBP8.47□□□□□ -1.05
GABPA-201ENST00000354828 ZBTB37Q5TC79 503 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 MALSU1Q96EH3 234 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 ADTRPQ96IZ2 230 aa8.47□□□□□ -1.05
GABPA-201ENST00000354828 MAP6Q96JE9 813 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms