RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 CYC1P08574 325 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 PNLIPP16233 465 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 RPS10P46783 165 aaKnown RBP9.92□□□□□ -0.82
CAPN9-202ENST00000354537 RND3P61587 244 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 BAXQ07812 192 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 EXT1Q16394 746 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 TMEM176BQ3YBM2 270 aaPredicted RBP9.92□□□□□ -0.82
CAPN9-202ENST00000354537 CLEC9AQ6UXN8 241 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 ZNF574Q6ZN55 896 aaPredicted RBP9.92□□□□□ -0.82
CAPN9-202ENST00000354537 Q6ZS49 121 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 SLC35E3Q7Z769 313 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 PPP1R3BQ86XI6 285 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 CLEC18CQ8NCF0 446 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 TVP23CQ96ET8 276 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 WDR77Q9BQA1 342 aaPredicted RBP9.92□□□□□ -0.82
CAPN9-202ENST00000354537 MYOTQ9UBF9 498 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 NXT1Q9UKK6 140 aaKnown RBP9.92□□□□□ -0.82
CAPN9-202ENST00000354537 CCDC187A0A096LP49 1063 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 OR5H15A6NDH6 313 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 DKK1O94907 266 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 ATP6V0CP27449 155 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 RGS19P49795 217 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 NXPH1P58417 271 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 FAM27BQ5VT28 67 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 TMEM42Q69YG0 159 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 ZNF100Q8IYN0 542 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 THAP3Q8WTV1 239 aaPredicted RBP9.92□□□□□ -0.82
CAPN9-202ENST00000354537 RAB39BQ96DA2 213 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 LYRM2Q9NU23 88 aaPredicted RBP9.92□□□□□ -0.82
CAPN9-202ENST00000354537 TDRD6O60522 2096 aaKnown RBP9.91□□□□□ -0.82
CAPN9-202ENST00000354537 TRAV1-1A0A0B4J248 108 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 PIGBOS1A0A0B4J2F0 54 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 PHF1O43189 567 aaPredicted RBP9.91□□□□□ -0.82
CAPN9-202ENST00000354537 RAMP1O60894 148 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 GLB1P16278 677 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 CRYGSP22914 178 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 TAGLN2P37802 199 aaKnown RBP9.91□□□□□ -0.82
CAPN9-202ENST00000354537 RBP2P50120 134 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 RRADP55042 308 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 UBE2KP61086 200 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 HERV-K104P61576 105 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 MRPS34P82930 218 aaKnown RBP9.91□□□□□ -0.82
CAPN9-202ENST00000354537 ELOBQ15370 118 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 TAF9Q16594 264 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 NCMAPQ5T1S8 102 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 SHISA6Q6ZSJ9 500 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 TMEM123Q8N131 208 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 OSR2Q8N2R0 312 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 CADM4Q8NFZ8 388 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 TECTBQ96PL2 329 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 RARRES2Q99969 163 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 TMEM222Q9H0R3 208 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 GPR173Q9NS66 373 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 TMEM242Q9NWH2 141 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 MTCH2Q9Y6C9 303 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 CHD9Q3L8U1 2897 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 C3orf85A0A1B0GTC6 90 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 BCAT2O15382 392 aaPredicted RBP9.91□□□□□ -0.82
CAPN9-202ENST00000354537 MPPED1O15442 326 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 PIAS2O75928 621 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 OPRM1P35372 400 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 NKX2-1P43699 371 aaPredicted RBP9.91□□□□□ -0.82
CAPN9-202ENST00000354537 GLIPR1P48060 266 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 SSTP61278 116 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 RAB35Q15286 201 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 NKAIN1Q4KMZ8 207 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 KHDC3LQ587J8 217 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 SLC22A25Q6T423 547 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 DBX2Q6ZNG2 339 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 CPEB2Q7Z5Q1 589 aaKnown RBP9.91□□□□□ -0.82
CAPN9-202ENST00000354537 SLC35G3Q8N808 338 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 OR10G3Q8NGC4 313 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 AKR7LQ8NHP1 331 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 NKX2-4Q9H2Z4 354 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 DOK5Q9P104 306 aa9.91□□□□□ -0.82
CAPN9-202ENST00000354537 PDCD6O75340 191 aa9.9□□□□□ -0.82
CAPN9-202ENST00000354537 SCAF4O95104 1147 aaKnown RBP9.9□□□□□ -0.82
CAPN9-202ENST00000354537 HAAOP46952 286 aa9.9□□□□□ -0.82
CAPN9-202ENST00000354537 FXYD4P59646 89 aa9.9□□□□□ -0.82
CAPN9-202ENST00000354537 TLE4Q04727 773 aa9.9□□□□□ -0.82
CAPN9-202ENST00000354537 PHLDA2Q53GA4 152 aa9.9□□□□□ -0.82
CAPN9-202ENST00000354537 FAM69BQ5VUD6 431 aa9.9□□□□□ -0.82
CAPN9-202ENST00000354537 ZNF429Q86V71 674 aa9.9□□□□□ -0.82
CAPN9-202ENST00000354537 DTX1Q86Y01 620 aa9.9□□□□□ -0.82
CAPN9-202ENST00000354537 TSTD1Q8NFU3 115 aa9.9□□□□□ -0.82
CAPN9-202ENST00000354537 OR10AD1Q8NGE0 317 aa9.9□□□□□ -0.82
CAPN9-202ENST00000354537 OR5L1Q8NGL2 311 aa9.9□□□□□ -0.82
CAPN9-202ENST00000354537 SPACA9Q96E40 222 aaPredicted RBP9.9□□□□□ -0.82
CAPN9-202ENST00000354537 BORCS8Q96FH0 119 aa9.9□□□□□ -0.82
CAPN9-202ENST00000354537 FAM86C1Q9NVL1 165 aa9.9□□□□□ -0.82
CAPN9-202ENST00000354537 IGSF23A1L1A6 192 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FAM90A10PA6NDY2 464 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FAM90A18PA6NE21 464 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FAM90A16PA6NEW6 464 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FAM24AA6NFZ4 105 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FAM90A20PA6NIJ5 464 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FAM90A8PA6NJQ4 464 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FAM90A7PA6NKC0 464 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 IFITM10A6NMD0 228 aa9.9□□□□□ -0.83
CAPN9-202ENST00000354537 FAM90A22PA8MWA6 464 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms