RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TFAP2CQ92754 450 aa12.77□□□□□ -0.37
PDGFA-201ENST00000354513 RNF166Q96A37 237 aaPredicted RBP12.77□□□□□ -0.37
PDGFA-201ENST00000354513 CLN6Q9NWW5 311 aa12.77□□□□□ -0.37
PDGFA-201ENST00000354513 H3BSH0 61 aa12.76□□□□□ -0.37
PDGFA-201ENST00000354513 RBP4P02753 201 aa12.76□□□□□ -0.37
PDGFA-201ENST00000354513 ZNF728P0DKX0 622 aa12.76□□□□□ -0.37
PDGFA-201ENST00000354513 IGHV1-8P0DP01 117 aa12.76□□□□□ -0.37
PDGFA-201ENST00000354513 LGALS4P56470 323 aa12.76□□□□□ -0.37
PDGFA-201ENST00000354513 IL18R1Q13478 541 aa12.76□□□□□ -0.37
PDGFA-201ENST00000354513 ZNF691Q5VV52 312 aa12.76□□□□□ -0.37
PDGFA-201ENST00000354513 CATSPERDQ86XM0 798 aa12.76□□□□□ -0.37
PDGFA-201ENST00000354513 ASCC1Q8N9N2 400 aaKnown RBP12.76□□□□□ -0.37
PDGFA-201ENST00000354513 SETD9Q8NE22 299 aa12.76□□□□□ -0.37
PDGFA-201ENST00000354513 FOXRED1Q96CU9 486 aaPredicted RBP12.76□□□□□ -0.37
PDGFA-201ENST00000354513 ZNF184Q99676 751 aaPredicted RBP12.76□□□□□ -0.37
PDGFA-201ENST00000354513 CITED2Q99967 270 aaPredicted RBP12.76□□□□□ -0.37
PDGFA-201ENST00000354513 H2AFY2Q9P0M6 372 aaPredicted RBP12.76□□□□□ -0.37
PDGFA-201ENST00000354513 SNX5Q9Y5X3 404 aa12.76□□□□□ -0.37
PDGFA-201ENST00000354513 FAM230AA0A1W2PPH8 454 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 ZNF670-ZNF695F2Z2N8 137 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 MPZL2O60487 215 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 IGHA1P01876 353 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 GNAO1P09471 354 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 SNRPGP62308 76 aaKnown RBP12.75□□□□□ -0.37
PDGFA-201ENST00000354513 CNN3Q15417 329 aaKnown RBP12.75□□□□□ -0.37
PDGFA-201ENST00000354513 SSX2Q16385 188 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 ODF4Q2M2E3 257 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 ENTHD1Q8IYW4 607 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 C8orf59Q8N0T1 100 aaPredicted RBP12.75□□□□□ -0.37
PDGFA-201ENST00000354513 OR8H2Q8N162 312 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 OR52N4Q8NGI2 321 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 SLAMF9Q96A28 289 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 MALSU1Q96EH3 234 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 MNTQ99583 582 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 TBX5Q99593 518 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 AASSQ9UDR5 926 aa12.75□□□□□ -0.37
PDGFA-201ENST00000354513 hCG_1809904A0A1W2PP81 198 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 A0A1W2PPE2 198 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 A0A1W2PR64 198 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 A0A1W2PRV1 198 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 MMP23AO75900 390 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 RPP14O95059 124 aaKnown RBP12.74□□□□□ -0.37
PDGFA-201ENST00000354513 APOL3O95236 402 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 DYNLT3P51808 116 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 EDDM3BP56851 147 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 BLCAPP62952 87 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 BAIAP2L2Q6UXY1 529 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 NDUFA11Q86Y39 141 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 GID4Q8IVV7 300 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 PRSS35Q8N3Z0 413 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 TPRX1Q8N7U7 411 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 OR13D1Q8NGV5 346 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 RHOXF1Q8NHV9 184 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 RPS4Y2Q8TD47 263 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 CEP19Q96LK0 163 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 AURKAIP1Q9NWT8 199 aaPredicted RBP12.74□□□□□ -0.37
PDGFA-201ENST00000354513 RAB26Q9ULW5 256 aa12.74□□□□□ -0.37
PDGFA-201ENST00000354513 PSPNO60542 156 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 INMTO95050 263 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 CHRM2P08172 466 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 GABRB1P18505 474 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 KIR3DL2P43630 455 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 ISL1P61371 349 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 ACTA2P62736 377 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 ACTG2P63267 376 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 ACTC1P68032 377 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 ACTA1P68133 377 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 ZNF91Q05481 1191 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 SLC25A30Q5SVS4 291 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 MEDAGQ5VYS4 303 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 PHF21AQ96BD5 680 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 ZNF714Q96N38 554 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 OR5M11Q96RB7 305 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 OCSTAMPQ9BR26 566 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 CHST5Q9GZS9 411 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 HSPE1-MOB4S4R3N1 261 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 KIAA2026Q5HYC2 2103 aa12.73□□□□□ -0.37
PDGFA-201ENST00000354513 NOTCH3Q9UM47 2321 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 IGHV2-26A0A0B4J1V2 119 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 IGKV1-9A0A0C4DH69 117 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 A0A1W2PQL4 384 aaPredicted RBP12.72□□□□□ -0.37
PDGFA-201ENST00000354513 FAM90A22PA8MWA6 464 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 PIN1P1O15428 100 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 ENTPD6O75354 484 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 NPBWR2P48146 333 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 EDDM3AQ14507 147 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 SLC25A26Q70HW3 274 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 GDPD3Q7L5L3 318 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 YIPF7Q8N8F6 280 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 OR4S1Q8NGB4 309 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 CNIH3Q8TBE1 160 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 SNX22Q96L94 193 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 Q96MT0 163 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 ANKRD60Q9BZ19 345 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 PRSS22Q9GZN4 317 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 CHST6Q9GZX3 395 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 Q9H521 79 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 SEBOXQ9HB31 216 aaPredicted RBP12.72□□□□□ -0.37
PDGFA-201ENST00000354513 ABCB10Q9NRK6 738 aa12.72□□□□□ -0.37
PDGFA-201ENST00000354513 RBFOX1Q9NWB1 397 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms