RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 C2orf88Q9BSF0 95 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 PRAMEF26H0Y7S4 382 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 TNFSF11O14788 317 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 EDN3P14138 238 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 HIKESHIQ53FT3 197 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 MAMSTRQ6ZN01 415 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 CES1P1Q9UKY3 287 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 PSG11Q9UQ72 335 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 AMY1AP04745 511 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 MELTFP08582 738 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 PKDCCQ504Y2 493 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 FAAP20Q6NZ36 180 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 ASB5Q8WWX0 329 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 FAM131CQ96AQ9 280 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 PDLIM7Q9NR12 457 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 FER1L5A0AVI2 2057 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 FAM221AA4D161 298 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 IL4P05112 153 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 LYPD8Q6UX82 237 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 MED25Q71SY5 747 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 GLCCI1Q86VQ1 547 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 LINC00346Q8IVM7 164 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 MBNL1Q9NR56 388 aaKnown RBP11.3□□□□□ -0.6
COL6A3-203ENST00000353578 HS3ST3A1Q9Y663 406 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 PI4KAP42356 2102 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.3□□□□□ -0.6
COL6A3-203ENST00000353578 PMS2P1A4D2B8 440 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 HPXP02790 462 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 C16orf82Q7Z2V1 217 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 POC1AQ8NBT0 407 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 PFN4Q8NHR9 129 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 CLDN23Q96B33 292 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 TNFSF15O95150 251 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 CYB561D1Q8N8Q1 229 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 OR4C12Q96R67 309 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 ZNF430Q9H8G1 570 aaPredicted RBP11.29□□□□□ -0.6
COL6A3-203ENST00000353578 GKN1Q9NS71 199 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 TAF1P21675 1872 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 C3orf85A0A1B0GTC6 90 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 SNURFLB1AK76 121 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 PRSS56P0CW18 603 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 TCFL5Q9UL49 500 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 NPIPB8E9PQR5 432 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 PPP6CO00743 305 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 NPIPB7O75200 414 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 LBX1P52954 281 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 PRSS36Q5K4E3 855 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 SIPA1L3O60292 1781 aaPredicted RBP11.29□□□□□ -0.6
COL6A3-203ENST00000353578 DOCK5Q9H7D0 1870 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 DHRS7CA6NNS2 312 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 MUC1P15941 1255 aaPredicted RBP11.29□□□□□ -0.6
COL6A3-203ENST00000353578 FOLR3P41439 243 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 SLC37A1P57057 533 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 TMEM179BQ7Z7N9 219 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 RNF133Q8WVZ7 376 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 RGPD3A6NKT7 1758 aaPredicted RBP11.29□□□□□ -0.6
COL6A3-203ENST00000353578 RGPD4Q7Z3J3 1758 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 ZC3H12DA2A288 527 aaKnown RBP11.29□□□□□ -0.6
COL6A3-203ENST00000353578 CST7O76096 145 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 SEC11AP67812 179 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 ABHD17CQ6PCB6 329 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 OR2Y1Q8NGV0 311 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 IL17FQ96PD4 163 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 CHODLQ9H9P2 273 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 JKAMPQ9P055 326 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 DOCK3Q8IZD9 2030 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 A0A1B0GW15 77 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 CNIH1O95406 144 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 SEMG2Q02383 582 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 GAB4Q2WGN9 574 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 MUCL1Q96DR8 90 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 CAMTA1Q9Y6Y1 1673 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 INSL6Q9Y581 213 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 LINC01387J3KSC0 135 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 M0R3E3 92 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 GHRHP01286 108 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 CTSCP53634 463 aa11.29□□□□□ -0.6
COL6A3-203ENST00000353578 DOCK4Q8N1I0 1966 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 TIAL1Q01085 375 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL6A3-203ENST00000353578 FUT7Q11130 342 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 MGST2Q99735 147 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 GPR3P46089 330 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 DCDP81605 110 aaKnown RBP11.28□□□□□ -0.6
COL6A3-203ENST00000353578 DNAJA3Q96EY1 480 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 C19orf24Q9BVV8 132 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 TMEM30CPA0ZSE6 113 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 SEC13P55735 322 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 EXOSC7Q15024 291 aaKnown RBP11.28□□□□□ -0.6
COL6A3-203ENST00000353578 ZDHHC23Q8IYP9 409 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 TOX2Q96NM4 488 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 CNTD2Q9H8S5 307 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 PTRH2Q9Y3E5 179 aaKnown RBP11.28□□□□□ -0.6
COL6A3-203ENST00000353578 DOT1LQ8TEK3 1739 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 LRRK1Q38SD2 2015 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 LEPROTL1O95214 131 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 PFN3P60673 137 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 RNF175Q8N4F7 328 aa11.28□□□□□ -0.6
COL6A3-203ENST00000353578 MRPL37Q9BZE1 423 aaKnown RBP11.28□□□□□ -0.6
COL6A3-203ENST00000353578 C11orf68Q9H3H3 251 aaKnown RBP11.28□□□□□ -0.6
COL6A3-203ENST00000353578 IGFLR1Q9H665 355 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms