RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 RAP1AP62834 184 aa5.23□□□□□ -1.57
RFC1-201ENST00000349703 RPS24P62847 133 aaKnown RBP5.23□□□□□ -1.57
RFC1-201ENST00000349703 SSBP1Q04837 148 aaKnown RBP5.23□□□□□ -1.57
RFC1-201ENST00000349703 FAM219BQ5XKK7 198 aa5.23□□□□□ -1.57
RFC1-201ENST00000349703 AWAT2Q6E213 333 aa5.23□□□□□ -1.57
RFC1-201ENST00000349703 C20orf204Q6ZNR8 217 aa5.23□□□□□ -1.57
RFC1-201ENST00000349703 BCDIN3DQ7Z5W3 292 aaKnown RBP5.23□□□□□ -1.57
RFC1-201ENST00000349703 SHISA5Q8N114 240 aa5.23□□□□□ -1.57
RFC1-201ENST00000349703 C15orf54Q8N8G6 183 aa5.23□□□□□ -1.57
RFC1-201ENST00000349703 NPRL2Q8WTW4 380 aa5.23□□□□□ -1.57
RFC1-201ENST00000349703 SMIM3Q9BZL3 60 aa5.23□□□□□ -1.57
RFC1-201ENST00000349703 DPM3Q9P2X0 92 aa5.23□□□□□ -1.57
RFC1-201ENST00000349703 LRRC37AA6NMS7 1700 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 OR2AG2A6NM03 316 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 HEPACAM2A8MVW5 462 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 FADS1O60427 444 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 MPC2O95563 127 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 USF1P22415 310 aaPredicted RBP5.22□□□□□ -1.57
RFC1-201ENST00000349703 MPZP25189 248 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 UCP1P25874 307 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 ELLP55199 621 aaPredicted RBP5.22□□□□□ -1.57
RFC1-201ENST00000349703 ERVFRD-1P60508 538 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 UBE2IP63279 158 aaKnown RBP5.22□□□□□ -1.57
RFC1-201ENST00000349703 CDK5Q00535 292 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 EWSR1Q01844 656 aaKnown RBP eCLIP5.22□□□□□ -1.57
RFC1-201ENST00000349703 ZNF155Q12901 538 aaPredicted RBP5.22□□□□□ -1.57
RFC1-201ENST00000349703 PAPPA-AS1Q5QFB9 102 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 ZNF684Q5T5D7 378 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 OR10K2Q6IF99 312 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 CD200R1LQ6Q8B3 271 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 ZNF620Q6ZNG0 422 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 TMPRSS9Q7Z410 1059 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 NEIL2Q969S2 332 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 SLC41A3Q96GZ6 507 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 SLC25A21Q9BQT8 299 aaPredicted RBP5.22□□□□□ -1.57
RFC1-201ENST00000349703 SOX7Q9BT81 388 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 ATG5Q9H1Y0 275 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 TXNIPQ9H3M7 391 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 C1RLQ9NZP8 487 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 PRSS21Q9Y6M0 314 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 SHROOM3Q8TF72 1996 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 A0A0G2JLL6 359 aaPredicted RBP5.22□□□□□ -1.57
RFC1-201ENST00000349703 DCNP07585 359 aaKnown RBP5.22□□□□□ -1.57
RFC1-201ENST00000349703 MRPL3P09001 348 aaKnown RBP5.22□□□□□ -1.57
RFC1-201ENST00000349703 ZNF83P51522 516 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 LINC00310P59036 64 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 SPCS3P61009 180 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 ZNF616Q08AN1 781 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 BSXQ3C1V8 233 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 SCGB2B2Q4G0G5 96 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 CD300LGQ6UXG3 332 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 RBPMS2Q6ZRY4 209 aaKnown RBP5.22□□□□□ -1.57
RFC1-201ENST00000349703 ZNF627Q7L945 461 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 PUSL1Q8N0Z8 303 aaKnown RBP5.22□□□□□ -1.57
RFC1-201ENST00000349703 OR2AK2Q8NG84 335 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 CST11Q9H112 138 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 FBXL15Q9H469 300 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 IL26Q9NPH9 171 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 KLRC4-KLRK1H3BQV0 150 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 NDUFB6O95139 128 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 GPR4P46093 362 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 RPL32P62910 135 aaKnown RBP5.22□□□□□ -1.57
RFC1-201ENST00000349703 ZNF584Q8IVC4 421 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 NKAIN4Q8IVV8 208 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 ZNF676Q8N7Q3 588 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 ZNF519Q8TB69 540 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 ARPC1AQ92747 370 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 SFRP2Q96HF1 295 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 SMIM8Q96KF7 97 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 PRRT1Q99946 306 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 OR51M1Q9H341 326 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 RAB18Q9NP72 206 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 IGLV7-46A0A075B6I9 117 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 BORCS7-ASMTA0A0B4J1R7 106 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 KIR2DS1A0A191URI9 304 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 SLC17A3O00476 420 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 PDE6DO43924 150 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 IGHV2-70P01814 119 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 DAOP14920 347 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 PAX6P26367 422 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 CSNK1DP48730 415 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 KIR2DS1Q14954 304 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 OR10S1Q8NGN2 331 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 MRPL53Q96EL3 112 aaKnown RBP5.22□□□□□ -1.57
RFC1-201ENST00000349703 KLF16Q9BXK1 252 aaPredicted RBP5.22□□□□□ -1.57
RFC1-201ENST00000349703 PDFQ9HBH1 243 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 PHPT1Q9NRX4 125 aaPredicted RBP5.22□□□□□ -1.57
RFC1-201ENST00000349703 MMP24Q9Y5R2 645 aa5.22□□□□□ -1.57
RFC1-201ENST00000349703 ADAMTSL1Q8N6G6 1762 aa5.21□□□□□ -1.57
RFC1-201ENST00000349703 KCNE1BA0A087WTH5 132 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 A0A1W2PPK0 400 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 EMC8O43402 210 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 EIF1BO60739 113 aaKnown RBP5.21□□□□□ -1.58
RFC1-201ENST00000349703 PRH1P02810 166 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 NTF4P34130 210 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 EIF1P41567 113 aaKnown RBP5.21□□□□□ -1.58
RFC1-201ENST00000349703 MRPS21P82921 87 aaKnown RBP5.21□□□□□ -1.58
RFC1-201ENST00000349703 AESQ08117 197 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 TXNDC8Q6A555 127 aa5.21□□□□□ -1.58
RFC1-201ENST00000349703 FAM71E1Q6IPT2 247 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms