RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 DKKL1Q9UK85 242 aa12.42□□□□□ -0.42
RLIM-202ENST00000349225 LTBP2Q14767 1821 aa12.42□□□□□ -0.42
RLIM-202ENST00000349225 RRP8O43159 456 aaKnown RBP12.42□□□□□ -0.42
RLIM-202ENST00000349225 PDLIM4P50479 330 aa12.42□□□□□ -0.42
RLIM-202ENST00000349225 HNRNPKP61978 463 aaKnown RBP eCLIP12.42□□□□□ -0.42
RLIM-202ENST00000349225 COMMD2Q86X83 199 aa12.42□□□□□ -0.42
RLIM-202ENST00000349225 CARFQ8N187 725 aa12.42□□□□□ -0.42
RLIM-202ENST00000349225 D2HGDHQ8N465 521 aa12.42□□□□□ -0.42
RLIM-202ENST00000349225 LRTM2Q8N967 370 aa12.42□□□□□ -0.42
RLIM-202ENST00000349225 OR14L1PQ8NHC6 308 aa12.42□□□□□ -0.42
RLIM-202ENST00000349225 LIN37Q96GY3 246 aaPredicted RBP12.42□□□□□ -0.42
RLIM-202ENST00000349225 URM1Q9BTM9 101 aaKnown RBP12.42□□□□□ -0.42
RLIM-202ENST00000349225 EMC6Q9BV81 110 aa12.42□□□□□ -0.42
RLIM-202ENST00000349225 TMED7-TICAM2A0A0A6YYA0 188 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 SHISA7A6NL88 538 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 PFN1P07737 140 aaKnown RBP12.41□□□□□ -0.42
RLIM-202ENST00000349225 GABRR1P24046 479 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 DUSP1P28562 367 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 MPV17LQ2QL34 196 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 LIAT1Q6ZQX7 453 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 GNG13Q9P2W3 67 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 GAB2Q9UQC2 676 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 CHD9Q3L8U1 2897 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 KIR2DL5BA0A0G2JN68 375 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 KIR2DL5BA0A0G2JPC4 375 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 PITX3O75364 302 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 TMEM225BP0DP42 221 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 CLN3Q13286 438 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 PMS2P11Q13670 270 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 SSX7Q7RTT5 188 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 SLC16A14Q7RTX9 510 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 KIR2DL5AQ8N109 375 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 NECAP1Q8NC96 275 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 OR5C1Q8NGR4 320 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 FAAP24Q9BTP7 215 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 SRD5A3Q9H8P0 318 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 LHFPL6Q9Y693 200 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 CFAP54Q96N23 3096 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 SLC33A1O00400 549 aaPredicted RBP12.41□□□□□ -0.42
RLIM-202ENST00000349225 CST7O76096 145 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 SFTPDP35247 375 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 OPRM1P35372 400 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 FXYD4P59646 89 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 TRA2AQ13595 282 aaKnown RBP eCLIP12.41□□□□□ -0.42
RLIM-202ENST00000349225 TAF9Q16594 264 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 CLEC12BQ2HXU8 276 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 RSPO4Q2I0M5 234 aaPredicted RBP12.41□□□□□ -0.42
RLIM-202ENST00000349225 DYRK2Q92630 601 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 TP53RKQ96S44 253 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 SLC2A9Q9NRM0 540 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 ANXA10Q9UJ72 324 aa12.41□□□□□ -0.42
RLIM-202ENST00000349225 KNL1Q8NG31 2342 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 RP1P56715 2156 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 CCDC163A0A0D9SF12 145 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 FAM230AA0A1W2PPH8 454 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 GALNSP34059 522 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 GAGE1Q13065 139 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 KISS1Q15726 138 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 ARMC6Q6NXE6 501 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 DTD1Q8TEA8 209 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 CCDC3Q9BQI4 270 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 MAGT1Q9H0U3 335 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 ZNF665Q9H7R5 613 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 NKX2-6A6NCS4 301 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 ZNF732B4DXR9 585 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 CA11O75493 328 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 SELEP16581 610 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 DYNLT3P51808 116 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 ZNF121P58317 390 aaPredicted RBP12.4□□□□□ -0.42
RLIM-202ENST00000349225 DMRTA1Q5VZB9 504 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 TMEM217Q8N7C4 229 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 OR14C36Q8NHC7 312 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 ADAMTS18Q8TE60 1221 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 PTPMT1Q8WUK0 201 aaPredicted RBP12.4□□□□□ -0.42
RLIM-202ENST00000349225 PYGO2Q9BRQ0 406 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 ELOVL1Q9BW60 279 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 VAX2Q9UIW0 290 aa12.4□□□□□ -0.42
RLIM-202ENST00000349225 LAMA1P25391 3075 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 IRF2P14316 349 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 WNT5AP41221 380 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 RPL29P47914 159 aaKnown RBP12.39□□□□□ -0.43
RLIM-202ENST00000349225 ERVS71-1P61550 626 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 RPS21P63220 83 aaKnown RBP12.39□□□□□ -0.43
RLIM-202ENST00000349225 MFAP5Q13361 173 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 HNF4GQ14541 408 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 ZNF266Q14584 549 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 C1orf194Q5T5A4 169 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 KLHL24Q6TFL4 600 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 TMEM252Q8N6L7 170 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 OR10G4Q8NGN3 311 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 HRASLS2Q9NWW9 162 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 MYOTQ9UBF9 498 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 A0A1B0GUS0 222 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 ZFP92A6NM28 416 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 SERPINE3A8MV23 424 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 GALR2O43603 387 aaPredicted RBP12.39□□□□□ -0.43
RLIM-202ENST00000349225 OPN1MWP04001 364 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 OPN1MW2P0DN77 364 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 OPN1MW3P0DN78 364 aa12.39□□□□□ -0.43
RLIM-202ENST00000349225 GNG10P50151 68 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms