RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 NEU3Q9UQ49 428 aa13.63□□□□□ -0.23
PTPRO-202ENST00000348962 BOLA1Q9Y3E2 137 aa13.63□□□□□ -0.23
PTPRO-202ENST00000348962 URGCP-MRPS24S4R325 110 aa13.63□□□□□ -0.23
PTPRO-202ENST00000348962 ASCL1P50553 236 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 FAM214BQ7L5A3 538 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 HSD17B10Q99714 261 aaKnown RBP13.62□□□□□ -0.23
PTPRO-202ENST00000348962 ZNF230Q9UIE0 474 aaPredicted RBP13.62□□□□□ -0.23
PTPRO-202ENST00000348962 UBE2L5PA0A1B0GUS4 154 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 A0A1B0GVG6 124 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 SEC14L6B5MCN3 397 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 HYAL3O43820 417 aaPredicted RBP13.62□□□□□ -0.23
PTPRO-202ENST00000348962 ZNF239Q16600 458 aaKnown RBP13.62□□□□□ -0.23
PTPRO-202ENST00000348962 TMEM251Q8N6I4 163 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 OR5AP2Q8NGF4 316 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 RBPMSQ93062 196 aaKnown RBP13.62□□□□□ -0.23
PTPRO-202ENST00000348962 DGAT2L6Q6ZPD8 337 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 DIRC2Q96SL1 478 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 UMAD1C9J7I0 102 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 DUS4LO95620 317 aaKnown RBP13.62□□□□□ -0.23
PTPRO-202ENST00000348962 WNT1P04628 370 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 EXOSC2Q13868 293 aaKnown RBP13.62□□□□□ -0.23
PTPRO-202ENST00000348962 ZNF528Q3MIS6 628 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 FAM162BQ5T6X4 162 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 FAM219BQ5XKK7 198 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 SRRQ9GZT4 340 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 CNTD2Q9H8S5 307 aa13.62□□□□□ -0.23
PTPRO-202ENST00000348962 LSM2Q9Y333 95 aaKnown RBP13.62□□□□□ -0.23
PTPRO-202ENST00000348962 OOEPA6NGQ2 149 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 HAND1O96004 215 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 FCARP24071 287 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 TNXAQ16473 311 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 LRRTM1Q86UE6 522 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 GLCCI1Q86VQ1 547 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 TGIF2LYQ8IUE0 185 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 TGIF2LXQ8IUE1 241 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 MTFP1Q9UDX5 166 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 V9GYS6 101 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 UBR3Q6ZT12 1888 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 ZNF260Q3ZCT1 412 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 ZAR1Q86SH2 424 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 ST8SIA2Q92186 375 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 ZNF629Q9UEG4 869 aaPredicted RBP13.61□□□□□ -0.23
PTPRO-202ENST00000348962 PRR33A8MZF0 331 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 CSRP2Q16527 193 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 ETV3LQ6ZN32 361 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 OR5A2Q8NGI9 324 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 ZNRF4Q8WWF5 429 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 LPAR3Q9UBY5 353 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 MRM2Q9UI43 246 aaKnown RBP13.61□□□□□ -0.23
PTPRO-202ENST00000348962 PPP1R2P9O14990 202 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 OIP5O43482 229 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 CA11O75493 328 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 MAGEB1P43366 347 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 OR8D4Q8NGM9 314 aa13.61□□□□□ -0.23
PTPRO-202ENST00000348962 EP300Q09472 2414 aaPredicted RBP13.61□□□□□ -0.23
PTPRO-202ENST00000348962 TMEM210A6NLX4 147 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 OXA1LQ15070 435 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 CCDC144NLQ6NUI1 221 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 SLC25A32Q9H2D1 315 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 TREM2Q9NZC2 230 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 INSIG2Q9Y5U4 225 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 C3orf85A0A1B0GTC6 90 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 K7ESF4 209 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 NGFRP08138 427 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 PRSS12P56730 875 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 AVPI1Q5T686 147 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 MUC20Q8N307 709 aaPredicted RBP13.6□□□□□ -0.23
PTPRO-202ENST00000348962 IGHV1-45A0A0A0MS14 117 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 PYCARD-AS1I3L0S3 204 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 RHOBP62745 196 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 SLC52A3Q9NQ40 469 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 PPIAL4EA0A075B759 164 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 PPIAL4DF5H284 164 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 CTAG2O75638 210 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 IGHV3-13P01766 116 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 IGHV3-7P01780 117 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 PPIAL4FP0DN26 164 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 CBR1P16152 277 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 ZBTB37Q5TC79 503 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 WDR13Q9H1Z4 485 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 PPIAL4AQ9Y536 164 aa13.6□□□□□ -0.23
PTPRO-202ENST00000348962 A0A0J9YW62 118 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 BGLAPP02818 100 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 TGIF1Q15583 401 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 ZNF574Q6ZN55 896 aaPredicted RBP13.59□□□□□ -0.23
PTPRO-202ENST00000348962 MDP1Q86V88 176 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 DOLPP1Q86YN1 238 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 FAM181AQ8N9Y4 354 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 TMEM52Q8NDY8 209 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 NTNG2Q96CW9 530 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 WDR89Q96FK6 387 aaPredicted RBP13.59□□□□□ -0.23
PTPRO-202ENST00000348962 OR51I2Q9H344 312 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 SPTBN2O15020 2390 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 TSPO2Q5TGU0 170 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 FNDC7Q5VTL7 733 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 OR5R1Q8NH85 324 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 RXFP4Q8TDU9 374 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 GPR27Q9NS67 375 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 ZNF831Q5JPB2 1677 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 MYO5AQ9Y4I1 1855 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms