RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 A6NLC8 198 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 VSTM5A8MXK1 200 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 DTYMKP23919 212 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 CD200P41217 278 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 MAB21L1Q13394 359 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 IKZF1Q13422 519 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 ZMYND11Q15326 602 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 FIP1L1Q6UN15 594 aaKnown RBP15.85■□□□□ 0.13
PTN-201ENST00000348225 BPIFB2Q8N4F0 458 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 POC1AQ8NBT0 407 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 OR51S1Q8NGJ8 323 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 OR4K15Q8NH41 348 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 PRR7Q8TB68 274 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 CHAC2Q8WUX2 184 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 SNAPC3Q92966 411 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 NRIP2Q9BQI9 281 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 TINAGL1Q9GZM7 467 aaPredicted RBP15.85■□□□□ 0.13
PTN-201ENST00000348225 CHST6Q9GZX3 395 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 ZNF581Q9P0T4 197 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 RCC2Q9P258 522 aaKnown RBP15.85■□□□□ 0.13
PTN-201ENST00000348225 POU2F3Q9UKI9 436 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 EDARQ9UNE0 448 aa15.85■□□□□ 0.13
PTN-201ENST00000348225 A0A0B4J293 547 aa15.84■□□□□ 0.13
PTN-201ENST00000348225 ATXN7O15265 892 aaPredicted RBP15.84■□□□□ 0.13
PTN-201ENST00000348225 NOS1APO75052 506 aaPredicted RBP15.84■□□□□ 0.13
PTN-201ENST00000348225 AMY2BP19961 511 aa15.84■□□□□ 0.13
PTN-201ENST00000348225 HRH1P35367 487 aa15.84■□□□□ 0.13
PTN-201ENST00000348225 RAB25P57735 213 aa15.84■□□□□ 0.13
PTN-201ENST00000348225 TAS2R46P59540 309 aa15.84■□□□□ 0.13
PTN-201ENST00000348225 ERVK11-1P61568 191 aa15.84■□□□□ 0.13
PTN-201ENST00000348225 NCMAPQ5T1S8 102 aa15.84■□□□□ 0.13
PTN-201ENST00000348225 ELMOD3Q96FG2 381 aa15.84■□□□□ 0.13
PTN-201ENST00000348225 PRRT1Q99946 306 aa15.84■□□□□ 0.13
PTN-201ENST00000348225 GINS4Q9BRT9 223 aa15.84■□□□□ 0.13
PTN-201ENST00000348225 ST6GALNAC5Q9BVH7 336 aa15.84■□□□□ 0.13
PTN-201ENST00000348225 ZNF701Q9NV72 531 aaPredicted RBP15.84■□□□□ 0.13
PTN-201ENST00000348225 ALG5Q9Y673 324 aa15.84■□□□□ 0.13
PTN-201ENST00000348225 ZSCAN5BA6NJL1 495 aa15.83■□□□□ 0.13
PTN-201ENST00000348225 PEX14O75381 377 aa15.83■□□□□ 0.13
PTN-201ENST00000348225 NXPH2O95156 264 aa15.83■□□□□ 0.13
PTN-201ENST00000348225 IFNA6P05013 189 aa15.83■□□□□ 0.13
PTN-201ENST00000348225 DAZAP2Q15038 168 aaPredicted RBP15.83■□□□□ 0.13
PTN-201ENST00000348225 PDCD1Q15116 288 aa15.83■□□□□ 0.13
PTN-201ENST00000348225 CARTPTQ16568 116 aa15.83■□□□□ 0.13
PTN-201ENST00000348225 NKPD1Q17RQ9 610 aa15.83■□□□□ 0.13
PTN-201ENST00000348225 C4orf17Q53FE4 359 aa15.83■□□□□ 0.13
PTN-201ENST00000348225 PRAMEF6Q5VXH4 476 aa15.83■□□□□ 0.13
PTN-201ENST00000348225 ZNF554Q86TJ5 538 aa15.83■□□□□ 0.13
PTN-201ENST00000348225 BEST4Q8NFU0 473 aa15.83■□□□□ 0.13
PTN-201ENST00000348225 HS3ST6Q96QI5 342 aa15.83■□□□□ 0.13
PTN-201ENST00000348225 NPDC1Q9NQX5 325 aaPredicted RBP15.83■□□□□ 0.13
PTN-201ENST00000348225 SLC2A8Q9NY64 477 aa15.83■□□□□ 0.13
PTN-201ENST00000348225 IL36RNQ9UBH0 155 aa15.83■□□□□ 0.13
PTN-201ENST00000348225 CADP27708 2225 aa15.83■□□□□ 0.12
PTN-201ENST00000348225 VAX1Q5SQQ9 334 aa15.83■□□□□ 0.12
PTN-201ENST00000348225 ADAM5Q6NVV9 412 aa15.83■□□□□ 0.12
PTN-201ENST00000348225 OR5H2Q8NGV7 314 aa15.83■□□□□ 0.12
PTN-201ENST00000348225 CYYR1Q96J86 154 aa15.83■□□□□ 0.12
PTN-201ENST00000348225 SLC25A21Q9BQT8 299 aaPredicted RBP15.83■□□□□ 0.12
PTN-201ENST00000348225 NEURL2Q9BR09 285 aa15.83■□□□□ 0.12
PTN-201ENST00000348225 IFT22Q9H7X7 185 aa15.83■□□□□ 0.12
PTN-201ENST00000348225 C12orf4Q9NQ89 552 aa15.83■□□□□ 0.12
PTN-201ENST00000348225 COL6A6A6NMZ7 2263 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 IGHV3-64DA0A0J9YX35 117 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 UBE2QL1A1L167 161 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 MCRIP1C9JLW8 97 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 ARPC1BO15143 372 aaKnown RBP15.82■□□□□ 0.12
PTN-201ENST00000348225 PRAF2O60831 178 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 PTBP3O95758 552 aaKnown RBP15.82■□□□□ 0.12
PTN-201ENST00000348225 GLAP06280 429 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 CD3EP07766 207 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 ZNF735P0CB33 412 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 TRAPPC2P0DI81 140 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 TRAPPC2BP0DI82 140 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 GNLYP22749 145 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 ZNF81P51508 661 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 SPIN3Q5JUX0 258 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 IDO2Q6ZQW0 420 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 AKAP14Q86UN6 197 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 C11orf53Q8IXP5 236 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 GTF3AQ92664 365 aaKnown RBP15.82■□□□□ 0.12
PTN-201ENST00000348225 PLPPR2Q96GM1 343 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 HDHD3Q9BSH5 251 aaPredicted RBP15.82■□□□□ 0.12
PTN-201ENST00000348225 ZNF230Q9UIE0 474 aaPredicted RBP15.82■□□□□ 0.12
PTN-201ENST00000348225 ZDHHC8Q9ULC8 765 aa15.82■□□□□ 0.12
PTN-201ENST00000348225 PMP2P02689 132 aa15.81■□□□□ 0.12
PTN-201ENST00000348225 CSN2P05814 226 aa15.81■□□□□ 0.12
PTN-201ENST00000348225 FCGR3AP08637 254 aa15.81■□□□□ 0.12
PTN-201ENST00000348225 TNFSF4P23510 183 aa15.81■□□□□ 0.12
PTN-201ENST00000348225 DUSP1P28562 367 aa15.81■□□□□ 0.12
PTN-201ENST00000348225 OR3A3P47888 321 aa15.81■□□□□ 0.12
PTN-201ENST00000348225 RBM39Q14498 530 aaKnown RBP15.81■□□□□ 0.12
PTN-201ENST00000348225 ST3GAL2Q16842 350 aa15.81■□□□□ 0.12
PTN-201ENST00000348225 MICBQ29980 383 aa15.81■□□□□ 0.12
PTN-201ENST00000348225 CHRFAM7AQ494W8 412 aa15.81■□□□□ 0.12
PTN-201ENST00000348225 SCGB2B2Q4G0G5 96 aa15.81■□□□□ 0.12
PTN-201ENST00000348225 BRICD5Q6PL45 260 aa15.81■□□□□ 0.12
PTN-201ENST00000348225 WDR82Q6UXN9 313 aa15.81■□□□□ 0.12
PTN-201ENST00000348225 ARRDC1Q8N5I2 433 aa15.81■□□□□ 0.12
PTN-201ENST00000348225 LINC01560Q8TB33 94 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms