RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ZNF665Q9H7R5 613 aa20.46■□□□□ 0.87
NPAS3-201ENST00000346562 TMEM167BQ9NRX6 74 aa20.46■□□□□ 0.87
NPAS3-201ENST00000346562 UFC1Q9Y3C8 167 aa20.46■□□□□ 0.87
NPAS3-201ENST00000346562 C9orf170A2RU37 121 aa20.46■□□□□ 0.87
NPAS3-201ENST00000346562 TRDCB7Z8K6 153 aa20.46■□□□□ 0.87
NPAS3-201ENST00000346562 MAGEA5P43359 124 aa20.46■□□□□ 0.87
NPAS3-201ENST00000346562 UCNP55089 124 aa20.46■□□□□ 0.87
NPAS3-201ENST00000346562 SIGLEC14Q08ET2 396 aa20.46■□□□□ 0.87
NPAS3-201ENST00000346562 GNG7O60262 68 aa20.45■□□□□ 0.87
NPAS3-201ENST00000346562 MAP6Q96JE9 813 aa20.45■□□□□ 0.87
NPAS3-201ENST00000346562 ZMIZ1Q9ULJ6 1067 aa20.45■□□□□ 0.87
NPAS3-201ENST00000346562 GGNBP1Q5YKI7 109 aa20.45■□□□□ 0.86
NPAS3-201ENST00000346562 LAMB1P07942 1786 aa20.45■□□□□ 0.86
NPAS3-201ENST00000346562 SLC6A1P30531 599 aa20.45■□□□□ 0.86
NPAS3-201ENST00000346562 FGF9P31371 208 aaPredicted RBP20.45■□□□□ 0.86
NPAS3-201ENST00000346562 C10orf35Q96D05 121 aa20.45■□□□□ 0.86
NPAS3-201ENST00000346562 TRAPPC4Q9Y296 219 aa20.45■□□□□ 0.86
NPAS3-201ENST00000346562 ASB5Q8WWX0 329 aa20.45■□□□□ 0.86
NPAS3-201ENST00000346562 SLC7A10Q9NS82 523 aa20.45■□□□□ 0.86
NPAS3-201ENST00000346562 FXYD1O00168 92 aa20.45■□□□□ 0.86
NPAS3-201ENST00000346562 MOGAT3Q86VF5 341 aa20.45■□□□□ 0.86
NPAS3-201ENST00000346562 CNTD2Q9H8S5 307 aa20.45■□□□□ 0.86
NPAS3-201ENST00000346562 CCKARP32238 428 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 GAMTQ14353 236 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 TECRQ9NZ01 308 aaKnown RBP20.44■□□□□ 0.86
NPAS3-201ENST00000346562 MTFP1Q9UDX5 166 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 MEX3AA1L020 520 aaKnown RBP20.44■□□□□ 0.86
NPAS3-201ENST00000346562 CDKN2AP42771 156 aaKnown RBP20.44■□□□□ 0.86
NPAS3-201ENST00000346562 UBE2L3P68036 154 aaKnown RBP20.44■□□□□ 0.86
NPAS3-201ENST00000346562 SSX8Q7RTT4 187 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 TUSC5Q8IXB3 177 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 ZBTB44Q8NCP5 570 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 COX14Q96I36 57 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 LPAR3Q9UBY5 353 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 STARD10Q9Y365 291 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 OPN1MWP04001 364 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 OPN1MW2P0DN77 364 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 OPN1MW3P0DN78 364 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 PPP1R1AQ13522 171 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 CCDC190Q86UF4 302 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 SLC26A10Q8NG04 563 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 HMGCLL1Q8TB92 370 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 FSCN3Q9NQT6 498 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 OR5AC1P0C628 307 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 PCMT1P22061 227 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 RPS4Y1P22090 263 aaKnown RBP20.44■□□□□ 0.86
NPAS3-201ENST00000346562 ZIC1Q15915 447 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 ZNF768Q9H5H4 540 aaKnown RBP20.44■□□□□ 0.86
NPAS3-201ENST00000346562 HIST1H3AP68431 136 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 NPAS1Q99742 590 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 WSB1Q9Y6I7 421 aa20.44■□□□□ 0.86
NPAS3-201ENST00000346562 ZFPL1O95159 310 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 B3GNTL1Q67FW5 361 aaPredicted RBP20.43■□□□□ 0.86
NPAS3-201ENST00000346562 SPICQ8N5J4 248 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 AMER3Q8N944 861 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 RBM14Q96PK6 669 aaKnown RBP20.43■□□□□ 0.86
NPAS3-201ENST00000346562 AKR7A2O43488 359 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 COL19A1Q14993 1142 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 ZBTB37Q5TC79 503 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 OR8B12Q8NGG6 310 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 RASL10BQ96S79 203 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 FABP4P15090 132 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 CTGFP29279 349 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 WNT3P56703 355 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 CD300LDQ6UXZ3 194 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 OR4A4PQ8NGN8 299 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 RHNO1Q9BSD3 238 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 MANBALQ9NQG1 85 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 KIAA1324LA8MWY0 1029 aaPredicted RBP20.43■□□□□ 0.86
NPAS3-201ENST00000346562 BCL3P20749 454 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 LSM6P62312 80 aaKnown RBP20.43■□□□□ 0.86
NPAS3-201ENST00000346562 ZNF441Q8N8Z8 693 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 NTMQ9P121 344 aa20.43■□□□□ 0.86
NPAS3-201ENST00000346562 DDX60LQ5H9U9 1706 aaKnown RBP20.43■□□□□ 0.86
NPAS3-201ENST00000346562 FAM24AA6NFZ4 105 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 ZNF154Q13106 437 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 SRSF5Q13243 272 aaKnown RBP20.42■□□□□ 0.86
NPAS3-201ENST00000346562 CLEC9AQ6UXN8 241 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 PATE4P0C8F1 98 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 ETFDHQ16134 617 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 ZNF66Q6ZN08 573 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 DUSP18Q8NEJ0 188 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 GZMKP49863 264 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 PAFAH1B2P68402 229 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 FDX2Q6P4F2 183 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 OR2C3Q8N628 320 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 FCN1O00602 326 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 TOMM20LQ6UXN7 152 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 MS4A5Q9H3V2 200 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 HERVK_113P61574 105 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 IL24Q13007 206 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 ZNF596Q8TC21 504 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 PERPQ96FX8 193 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 SLC6A13Q9NSD5 602 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 MMP24Q9Y5R2 645 aa20.42■□□□□ 0.86
NPAS3-201ENST00000346562 CACNA1SQ13698 1873 aa20.41■□□□□ 0.86
NPAS3-201ENST00000346562 CRXO43186 299 aaPredicted RBP20.41■□□□□ 0.86
NPAS3-201ENST00000346562 WNT1P04628 370 aa20.41■□□□□ 0.86
NPAS3-201ENST00000346562 ID1P41134 155 aa20.41■□□□□ 0.86
NPAS3-201ENST00000346562 HLXQ14774 488 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms