RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 CLDN15P56746 228 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 COX19Q49B96 90 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 SLC35E3Q7Z769 313 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 TBC1D26Q86UD7 250 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 CISD2Q8N5K1 135 aaKnown RBP10.74□□□□□ -0.69
COL12A1-202ENST00000345356 OR4B1Q8NGF8 309 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 PATE1Q8WXA2 126 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 MOGAT1Q96PD6 335 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 SLC26A1Q9H2B4 701 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 NPDC1Q9NQX5 325 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-202ENST00000345356 CARHSP1Q9Y2V2 147 aaKnown RBP10.74□□□□□ -0.69
COL12A1-202ENST00000345356 C5orf49A4QMS7 147 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 FBLL1A6NHQ2 334 aaKnown RBP10.74□□□□□ -0.69
COL12A1-202ENST00000345356 RER1O15258 196 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 BCL2P10415 239 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 DEFA4P12838 97 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 ST6GAL1P15907 406 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 DRD1P21728 446 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 MRPL54Q6P161 138 aaKnown RBP10.74□□□□□ -0.69
COL12A1-202ENST00000345356 LIMS2Q7Z4I7 341 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 UBALD1Q8TB05 177 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 THAP10Q9P2Z0 257 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-202ENST00000345356 KCNE5Q9UJ90 142 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 FRG2CA6NGY1 282 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 TMEM215Q68D42 235 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 VHLLQ6RSH7 139 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 BPIFA4PQ86YQ2 179 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 OR10AD1Q8NGE0 317 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 OR5D13Q8NGL4 314 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 BLNKQ8WV28 456 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 PCGF1Q9BSM1 259 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-202ENST00000345356 RALYQ9UKM9 306 aaKnown RBP10.74□□□□□ -0.69
COL12A1-202ENST00000345356 SOD3P08294 240 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 HOXA6P31267 233 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 DCDP81605 110 aaKnown RBP10.74□□□□□ -0.69
COL12A1-202ENST00000345356 ACY3Q96HD9 319 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 S1PR3Q99500 378 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 OPN3Q9H1Y3 402 aaPredicted RBP10.74□□□□□ -0.69
COL12A1-202ENST00000345356 DCAF16Q9NXF7 216 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 UQCR10Q9UDW1 63 aa10.74□□□□□ -0.69
COL12A1-202ENST00000345356 GAGE10A6NGK3 116 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 DHHO43323 396 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 GALR2O43603 387 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-202ENST00000345356 DHRS3O75911 302 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 TBC1D28Q2M2D7 210 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 LYSMD4Q5XG99 296 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 MRPL43Q8N983 215 aaKnown RBP10.73□□□□□ -0.69
COL12A1-202ENST00000345356 MAP1LC3CQ9BXW4 147 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 FOXJ2Q9P0K8 574 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 RREB1Q92766 1687 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 FOXF1Q12946 379 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 GABRA6Q16445 453 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 CDKN3Q16667 212 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 WDR61Q9GZS3 305 aaKnown RBP10.73□□□□□ -0.69
COL12A1-202ENST00000345356 WDR13Q9H1Z4 485 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 ANKRD10Q9NXR5 420 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 OR6C3Q9NZP0 311 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 SLC45A2Q9UMX9 530 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 DOT1LQ8TEK3 1739 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 IGHV3-15A0A0B4J1V0 119 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 NKX2-6A6NCS4 301 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 SYNGR2O43760 224 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 OR2J3O76001 311 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 ZNF205O95201 554 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 NANOS3P60323 173 aaKnown RBP10.73□□□□□ -0.69
COL12A1-202ENST00000345356 WDR74Q6RFH5 385 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-202ENST00000345356 RFLNBQ8N5W9 214 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 RLN3Q8WXF3 142 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 SLC25A38Q96DW6 304 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 OR2A5Q96R48 311 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 COL22A1Q8NFW1 1626 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-202ENST00000345356 RHBDL1O75783 438 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 CRYAAP02489 173 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 CSN3P07498 182 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 BRS3P32247 399 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 LBX1P52954 281 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 PNLIPRP2P54317 469 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 ZNF683Q8IZ20 524 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 A0A1B0GX78 115 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 MOSPD3O75425 235 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 HSPB1P04792 205 aaKnown RBP10.73□□□□□ -0.69
COL12A1-202ENST00000345356 RHOBP62745 196 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 FUT7Q11130 342 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 SPINK9Q5DT21 86 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 TEX30Q5JUR7 227 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 WDR25Q64LD2 544 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-202ENST00000345356 C17orf99Q6UX52 265 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 SGMS2Q8NHU3 365 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 ADAMTS17Q8TE56 1095 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 ASB5Q8WWX0 329 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 GALMQ96C23 342 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 DUSP13Q9UII6 198 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 ZDHHC8Q9ULC8 765 aa10.73□□□□□ -0.69
COL12A1-202ENST00000345356 H0Y8X5 98 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 CD38P28907 300 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 ERHP84090 104 aaKnown RBP10.72□□□□□ -0.69
COL12A1-202ENST00000345356 OR11L1Q8NGX0 322 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 NPIPB8E9PQR5 432 aa10.72□□□□□ -0.69
COL12A1-202ENST00000345356 PDCD6O75340 191 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms