RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 HAND1O96004 215 aa16.33■□□□□ 0.2
CEACAM3-201ENST00000344550 ZNF728P0DKX0 622 aa16.33■□□□□ 0.2
CEACAM3-201ENST00000344550 OMGP23515 440 aa16.33■□□□□ 0.2
CEACAM3-201ENST00000344550 DCKP27707 260 aa16.33■□□□□ 0.2
CEACAM3-201ENST00000344550 PEX2P28328 305 aa16.33■□□□□ 0.2
CEACAM3-201ENST00000344550 ERP29P30040 261 aaKnown RBP16.33■□□□□ 0.2
CEACAM3-201ENST00000344550 CEBPDP49716 269 aaPredicted RBP16.33■□□□□ 0.2
CEACAM3-201ENST00000344550 DLX6P56179 175 aa16.33■□□□□ 0.2
CEACAM3-201ENST00000344550 TTC23Q5W5X9 447 aa16.33■□□□□ 0.2
CEACAM3-201ENST00000344550 LIAT1Q6ZQX7 453 aa16.33■□□□□ 0.2
CEACAM3-201ENST00000344550 OR52I1Q8NGK6 324 aa16.33■□□□□ 0.2
CEACAM3-201ENST00000344550 RAB18Q9NP72 206 aa16.33■□□□□ 0.2
CEACAM3-201ENST00000344550 CLPXO76031 633 aa16.32■□□□□ 0.2
CEACAM3-201ENST00000344550 ZFPL1O95159 310 aa16.32■□□□□ 0.2
CEACAM3-201ENST00000344550 BMXP51813 675 aa16.32■□□□□ 0.2
CEACAM3-201ENST00000344550 LGALS4P56470 323 aa16.32■□□□□ 0.2
CEACAM3-201ENST00000344550 DHRS7BQ6IAN0 325 aaPredicted RBP16.32■□□□□ 0.2
CEACAM3-201ENST00000344550 OR4M1Q8NGD0 313 aa16.32■□□□□ 0.2
CEACAM3-201ENST00000344550 OR13D1Q8NGV5 346 aa16.32■□□□□ 0.2
CEACAM3-201ENST00000344550 OR5AK2Q8NH90 309 aa16.32■□□□□ 0.2
CEACAM3-201ENST00000344550 CDCA4Q9BXL8 241 aa16.32■□□□□ 0.2
CEACAM3-201ENST00000344550 HMG20AQ9NP66 347 aa16.32■□□□□ 0.2
CEACAM3-201ENST00000344550 AMBNQ9NP70 447 aa16.32■□□□□ 0.2
CEACAM3-201ENST00000344550 TBL2Q9Y4P3 447 aaKnown RBP16.32■□□□□ 0.2
CEACAM3-201ENST00000344550 LINC00312Q9Y6C7 94 aa16.32■□□□□ 0.2
CEACAM3-201ENST00000344550 FUOMA2VDF0 154 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 FAM90A8PA6NJQ4 464 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 SH2D1BO14796 132 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 MGST3O14880 152 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 KDM4BO94953 1096 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 LMO1P25800 156 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 POU3F4P49335 361 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 ZNF273Q14593 569 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 LRRC75BQ2VPJ9 315 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 C11orf88Q6PI97 169 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 SETD9Q8NE22 299 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 OR11H6Q8NGC7 330 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 OR51A4Q8NGJ6 313 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 LINC01006Q8NI28 216 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 APH1BQ8WW43 257 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 FOXRED1Q96CU9 486 aaPredicted RBP16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 CITED1Q99966 193 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 ISG20L2Q9H9L3 353 aaKnown RBP16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 AASSQ9UDR5 926 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 RNF114Q9Y508 228 aa16.31■□□□□ 0.2
CEACAM3-201ENST00000344550 A0A1W2PRD5 423 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 A0A1W2PRF3 423 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 A0A1W2PRM7 423 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 TMEM82A0PJX8 343 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 VGLL3A8MV65 326 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 SULT1B1O43704 296 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 WBP4O75554 376 aaKnown RBP16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 CCL3L1P16619 93 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 NPBWR2P48146 333 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 DLX1P56177 255 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 EDDM3BP56851 147 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 IL18R1Q13478 541 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 RPL22L1Q6P5R6 122 aaKnown RBP16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 TMPRSS11AQ6ZMR5 421 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 PNKDQ8N490 385 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 CHST4Q8NCG5 386 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 OR13C9Q8NGT0 318 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 OR10AC1Q8NH08 325 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 MALSU1Q96EH3 234 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 AJUBAQ96IF1 538 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 ZNF714Q96N38 554 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 SSX3Q99909 188 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 RBFOX1Q9NWB1 397 aaKnown RBP16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 DHDHQ9UQ10 334 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 HSPE1-MOB4S4R3N1 261 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 PKD1L1Q8TDX9 2849 aa16.3■□□□□ 0.2
CEACAM3-201ENST00000344550 LIMS3P0CW19 117 aa16.29■□□□□ 0.2
CEACAM3-201ENST00000344550 LIMS4P0CW20 117 aa16.29■□□□□ 0.2
CEACAM3-201ENST00000344550 PRKACAP17612 351 aa16.29■□□□□ 0.2
CEACAM3-201ENST00000344550 BCL3P20749 454 aa16.29■□□□□ 0.2
CEACAM3-201ENST00000344550 PROK1P58294 105 aa16.29■□□□□ 0.2
CEACAM3-201ENST00000344550 PRB3Q04118 309 aaPredicted RBP16.29■□□□□ 0.2
CEACAM3-201ENST00000344550 MED21Q13503 144 aa16.29■□□□□ 0.2
CEACAM3-201ENST00000344550 GRK1Q15835 563 aa16.29■□□□□ 0.2
CEACAM3-201ENST00000344550 ZNF691Q5VV52 312 aa16.29■□□□□ 0.2
CEACAM3-201ENST00000344550 BATF2Q8N1L9 274 aa16.29■□□□□ 0.2
CEACAM3-201ENST00000344550 RPS4Y2Q8TD47 263 aa16.29■□□□□ 0.2
CEACAM3-201ENST00000344550 RANBP3Q9H6Z4 567 aaPredicted RBP16.29■□□□□ 0.2
CEACAM3-201ENST00000344550 FBLN5Q9UBX5 448 aa16.29■□□□□ 0.2
CEACAM3-201ENST00000344550 UBE2J1Q9Y385 318 aaPredicted RBP16.29■□□□□ 0.2
CEACAM3-201ENST00000344550 TIMM23O14925 209 aa16.28■□□□□ 0.2
CEACAM3-201ENST00000344550 CSN2P05814 226 aa16.28■□□□□ 0.2
CEACAM3-201ENST00000344550 CD2P06729 351 aa16.28■□□□□ 0.2
CEACAM3-201ENST00000344550 IGHV1-8P0DP01 117 aa16.28■□□□□ 0.2
CEACAM3-201ENST00000344550 GABRR1P24046 479 aa16.28■□□□□ 0.2
CEACAM3-201ENST00000344550 KISS1Q15726 138 aa16.28■□□□□ 0.2
CEACAM3-201ENST00000344550 ZNF626Q68DY1 528 aa16.28■□□□□ 0.2
CEACAM3-201ENST00000344550 ZNF529Q6P280 563 aa16.28■□□□□ 0.2
CEACAM3-201ENST00000344550 Q6ZSV7 163 aa16.28■□□□□ 0.2
CEACAM3-201ENST00000344550 PXT1Q8NFP0 134 aa16.28■□□□□ 0.2
CEACAM3-201ENST00000344550 GPR148Q8TDV2 347 aa16.28■□□□□ 0.2
CEACAM3-201ENST00000344550 EXOSC4Q9NPD3 245 aaKnown RBP16.28■□□□□ 0.2
CEACAM3-201ENST00000344550 ODF3BA8MYP8 253 aa16.27■□□□□ 0.2
CEACAM3-201ENST00000344550 E9PI62 339 aa16.27■□□□□ 0.2
CEACAM3-201ENST00000344550 H3BUX3 64 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms