RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 DNASE2O00115 360 aaPredicted RBP18.47■□□□□ 0.55
CCDC38-201ENST00000344280 ABCD4O14678 606 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 MST1LQ2TV78 715 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 FAM74A3Q4VXF1 159 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 LINC00696Q6ZRV3 163 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 OR4A4PQ8NGN8 299 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 DDA1Q9BW61 102 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 PRDM14Q9GZV8 571 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 DNAJB11Q9UBS4 358 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 ZNF629Q9UEG4 869 aaPredicted RBP18.47■□□□□ 0.55
CCDC38-201ENST00000344280 RAB19A4D1S5 217 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 XRCC2O43543 280 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 RBM11P57052 281 aaKnown RBP18.47■□□□□ 0.55
CCDC38-201ENST00000344280 COLCA1Q6ZS62 124 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 OR56B2PQ8NGI1 322 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 OR11L1Q8NGX0 322 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 RTN4IP1Q8WWV3 396 aaPredicted RBP18.47■□□□□ 0.55
CCDC38-201ENST00000344280 HS3ST6Q96QI5 342 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 MEMO1Q9Y316 297 aa18.47■□□□□ 0.55
CCDC38-201ENST00000344280 ASPMQ8IZT6 3477 aa18.46■□□□□ 0.55
CCDC38-201ENST00000344280 PDCD6O75340 191 aa18.46■□□□□ 0.55
CCDC38-201ENST00000344280 OR1C1Q15619 314 aa18.46■□□□□ 0.55
CCDC38-201ENST00000344280 ABHD17BQ5VST6 288 aa18.46■□□□□ 0.55
CCDC38-201ENST00000344280 TTTY12Q9BZ98 90 aa18.46■□□□□ 0.55
CCDC38-201ENST00000344280 LSM5Q9Y4Y9 91 aaKnown RBP18.46■□□□□ 0.55
CCDC38-201ENST00000344280 TMEM218A2RU14 115 aa18.46■□□□□ 0.54
CCDC38-201ENST00000344280 ZNF705EA8MWA4 302 aaPredicted RBP18.46■□□□□ 0.54
CCDC38-201ENST00000344280 CDK2AP1O14519 115 aa18.46■□□□□ 0.54
CCDC38-201ENST00000344280 OR7C1O76099 320 aaPredicted RBP18.46■□□□□ 0.54
CCDC38-201ENST00000344280 SCGB1D2O95969 90 aa18.46■□□□□ 0.54
CCDC38-201ENST00000344280 TMEM187Q14656 261 aa18.46■□□□□ 0.54
CCDC38-201ENST00000344280 C3AR1Q16581 482 aa18.46■□□□□ 0.54
CCDC38-201ENST00000344280 PDSS1Q5T2R2 415 aa18.46■□□□□ 0.54
CCDC38-201ENST00000344280 UQCC3Q6UW78 93 aa18.46■□□□□ 0.54
CCDC38-201ENST00000344280 CCDC36Q8IYA8 594 aa18.46■□□□□ 0.54
CCDC38-201ENST00000344280 PAPOLGQ9BWT3 736 aaKnown RBP18.46■□□□□ 0.54
CCDC38-201ENST00000344280 TMEM231Q9H6L2 316 aa18.46■□□□□ 0.54
CCDC38-201ENST00000344280 NAA60Q9H7X0 242 aa18.46■□□□□ 0.54
CCDC38-201ENST00000344280 TUBD1Q9UJT1 453 aa18.46■□□□□ 0.54
CCDC38-201ENST00000344280 C5orf49A4QMS7 147 aa18.45■□□□□ 0.54
CCDC38-201ENST00000344280 GPR31O00270 319 aa18.45■□□□□ 0.54
CCDC38-201ENST00000344280 DEDDO75618 318 aa18.45■□□□□ 0.54
CCDC38-201ENST00000344280 ITGA3P26006 1051 aa18.45■□□□□ 0.54
CCDC38-201ENST00000344280 CLEC9AQ6UXN8 241 aa18.45■□□□□ 0.54
CCDC38-201ENST00000344280 LYZL2Q7Z4W2 148 aa18.45■□□□□ 0.54
CCDC38-201ENST00000344280 ADAMTS17Q8TE56 1095 aa18.45■□□□□ 0.54
CCDC38-201ENST00000344280 ZC4H2Q9NQZ6 224 aa18.45■□□□□ 0.54
CCDC38-201ENST00000344280 SLC2A9Q9NRM0 540 aa18.45■□□□□ 0.54
CCDC38-201ENST00000344280 LRP3O75074 770 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 ZNF883P0CG24 379 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 SPINK2P20155 84 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 RPL12P30050 165 aaKnown RBP18.44■□□□□ 0.54
CCDC38-201ENST00000344280 MALLQ13021 153 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 ABCA11PQ4W5N1 156 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 OR5L1Q8NGL2 311 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 ZNF442Q9H7R0 627 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 C12orf4Q9NQ89 552 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 PARPBPQ9NWS1 579 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 PLA2G2EQ9NZK7 142 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 LPAR3Q9UBY5 353 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 LOC400499M0QZD8 3231 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 ATG12O94817 140 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 NOVA1P51513 510 aaKnown RBP18.44■□□□□ 0.54
CCDC38-201ENST00000344280 DCAF10Q5QP82 559 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 ADAT1Q9BUB4 502 aaKnown RBP18.44■□□□□ 0.54
CCDC38-201ENST00000344280 SMIM3Q9BZL3 60 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 NKX6-2Q9C056 277 aaPredicted RBP18.44■□□□□ 0.54
CCDC38-201ENST00000344280 TAF9BQ9HBM6 251 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 ZNF286AQ9HBT8 521 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 RYDENQ9NUL5 291 aaKnown RBP18.44■□□□□ 0.54
CCDC38-201ENST00000344280 IL36RNQ9UBH0 155 aa18.44■□□□□ 0.54
CCDC38-201ENST00000344280 K7EPK0 472 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 IFNA21P01568 189 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 BCL3P20749 454 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 GUCA2BQ16661 112 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 NRN1LQ496H8 165 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 IGSF11Q5DX21 431 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 FAM71E2Q8N5Q1 922 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 HPSE2Q8WWQ2 592 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 ARL11Q969Q4 196 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 SLAMF9Q96A28 289 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 REPIN1Q9BWE0 567 aaKnown RBP18.43■□□□□ 0.54
CCDC38-201ENST00000344280 IL17BQ9UHF5 180 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 NGFP01138 241 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 FUT3P21217 361 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 GPM6AP51674 278 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 TMEM251Q8N6I4 163 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 GALNT14Q96FL9 552 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 BSCL2Q96G97 398 aaPredicted RBP18.43■□□□□ 0.54
CCDC38-201ENST00000344280 PRRX2Q99811 253 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 LINC00470Q9BZP3 86 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 HRH4Q9H3N8 390 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 FBXL17Q9UF56 701 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 KCNIP3Q9Y2W7 256 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 AMDHD2Q9Y303 409 aa18.43■□□□□ 0.54
CCDC38-201ENST00000344280 DIRAS3O95661 229 aa18.42■□□□□ 0.54
CCDC38-201ENST00000344280 MBPP02686 304 aaPredicted RBP18.42■□□□□ 0.54
CCDC38-201ENST00000344280 AADACP22760 399 aa18.42■□□□□ 0.54
CCDC38-201ENST00000344280 HAAOP46952 286 aa18.42■□□□□ 0.54
CCDC38-201ENST00000344280 PRDX4Q13162 271 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms