RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 HSPB1P04792 205 aaKnown RBP12.18□□□□□ -0.46
TRIO-202ENST00000344204 ALKAL1Q6UXT8 129 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 GALNT14Q96FL9 552 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 SLC35E2P0CK97 266 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 CCR2P41597 374 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 RAC1P63000 192 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 TRMT12Q53H54 448 aaKnown RBP12.18□□□□□ -0.46
TRIO-202ENST00000344204 SPNS2Q8IVW8 549 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 ADAMTS17Q8TE56 1095 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 SLC2A8Q9NY64 477 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 Q9Y3F1 56 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 LRP12Q9Y561 859 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 A0A1W2PR48 441 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 RHOBP62745 196 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 COL9A2Q14055 689 aaPredicted RBP12.18□□□□□ -0.46
TRIO-202ENST00000344204 PRTGQ2VWP7 1150 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 WDR38Q5JTN6 314 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 H1FOOQ8IZA3 346 aaPredicted RBP12.18□□□□□ -0.46
TRIO-202ENST00000344204 WDR61Q9GZS3 305 aaKnown RBP12.18□□□□□ -0.46
TRIO-202ENST00000344204 PRRX1P54821 245 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 EFNB1P98172 346 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 PTPMT1Q8WUK0 201 aaPredicted RBP12.17□□□□□ -0.46
TRIO-202ENST00000344204 PAPPAQ13219 1627 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 KLF3P57682 345 aaPredicted RBP12.17□□□□□ -0.46
TRIO-202ENST00000344204 PAQR9Q6ZVX9 377 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 SIGLEC11Q96RL6 698 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 SPINT2O43291 252 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 PRAMEF25A6NGN4 478 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 CCSMST1Q4G0I0 132 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 PRAMEF5Q5TYX0 476 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 PRAMEF6Q5VXH4 476 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 CISD2Q8N5K1 135 aaKnown RBP12.17□□□□□ -0.46
TRIO-202ENST00000344204 ZCCHC14Q8WYQ9 949 aaKnown RBP12.17□□□□□ -0.46
TRIO-202ENST00000344204 ZNF707Q96C28 371 aaPredicted RBP12.17□□□□□ -0.46
TRIO-202ENST00000344204 TRGC1P0CF51 173 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 TTC32Q5I0X7 151 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 C9orf131Q5VYM1 1079 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 PECRQ9BY49 303 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 SIP14410 1827 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 FAM216AQ8WUB2 273 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 KCNK15Q9H427 330 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 ZNF106Q9H2Y7 1883 aaKnown RBP12.17□□□□□ -0.46
TRIO-202ENST00000344204 CTSDP07339 412 aaPredicted RBP12.17□□□□□ -0.46
TRIO-202ENST00000344204 CSN1S1P47710 185 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 RPL34P49207 117 aaKnown RBP12.17□□□□□ -0.46
TRIO-202ENST00000344204 TGIF1Q15583 401 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 HIKESHIQ53FT3 197 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 EID2BQ96D98 161 aa12.17□□□□□ -0.46
TRIO-202ENST00000344204 TMPRSS11DO60235 418 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 KIAA0895LQ68EN5 471 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 AKIRIN1Q9H9L7 192 aaPredicted RBP12.16□□□□□ -0.46
TRIO-202ENST00000344204 VSTM5A8MXK1 200 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 SGMS2Q8NHU3 365 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 ZG16BQ96DA0 208 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 PRR13Q9NZ81 148 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 SSUH2Q9Y2M2 353 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 NXPH2O95156 264 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 SUB1P53999 127 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRIO-202ENST00000344204 RTL8BQ17RB0 113 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 OR10G4Q8NGN3 311 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 OR10G9Q8NGN4 311 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 OR10G7Q8NGN6 311 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 TSACCQ96A04 125 aaPredicted RBP12.16□□□□□ -0.46
TRIO-202ENST00000344204 TMEM147Q9BVK8 224 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 MMP9P14780 707 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 NR0B2Q15466 257 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 SLC25A34Q6PIV7 304 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 GVQW1Q8N7I0 195 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 C4orf45Q96LM5 186 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 MIEN1Q9BRT3 115 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 FAM221AA4D161 298 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 TMEM202A6NGA9 273 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 IFITM10A6NMD0 228 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 VHLLQ6RSH7 139 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 CTSSP25774 331 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 ZNF121P58317 390 aaPredicted RBP12.16□□□□□ -0.46
TRIO-202ENST00000344204 MLF2Q15773 248 aaPredicted RBP12.16□□□□□ -0.46
TRIO-202ENST00000344204 PRAMEF20Q5VT98 475 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 LAIR1Q6GTX8 287 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 RABEPKQ7Z6M1 372 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 C20orf141Q9NUB4 165 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 COL25A1Q9BXS0 654 aaPredicted RBP12.16□□□□□ -0.46
TRIO-202ENST00000344204 PIPOXQ9P0Z9 390 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 CLDN17P56750 224 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 KCNAB1Q14722 419 aa12.16□□□□□ -0.46
TRIO-202ENST00000344204 ZNF346Q9UL40 294 aaKnown RBP12.16□□□□□ -0.46
TRIO-202ENST00000344204 H3BVH4 76 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 HOXA5P20719 270 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 UQCRFS1P47985 274 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 AESQ08117 197 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 NPDC1Q9NQX5 325 aaPredicted RBP12.15□□□□□ -0.46
TRIO-202ENST00000344204 CES1P1Q9UKY3 287 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 FZD5Q13467 585 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 PRSS3P2Q8NHM4 247 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 TAAR6Q96RI8 345 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 KIF26AQ9ULI4 1882 aaPredicted RBP12.15□□□□□ -0.46
TRIO-202ENST00000344204 A0A0B4J2E0 115 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 A0A1B0GX12 115 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 CDC14CA4D256 554 aa12.15□□□□□ -0.46
TRIO-202ENST00000344204 DUX1O43812 170 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms