RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 IGHV3OR16-10A0A075B7F0 116 aa14.84□□□□□ -0.03
USF2-202ENST00000343550 DENRO43583 198 aaKnown RBP14.84□□□□□ -0.03
USF2-202ENST00000343550 RGS10O43665 173 aa14.84□□□□□ -0.03
USF2-202ENST00000343550 ANGPTL7O43827 346 aa14.84□□□□□ -0.03
USF2-202ENST00000343550 IGHV4-38-2P0DP08 117 aa14.84□□□□□ -0.03
USF2-202ENST00000343550 NDUFB7P17568 137 aa14.84□□□□□ -0.03
USF2-202ENST00000343550 BCL3P20749 454 aa14.84□□□□□ -0.03
USF2-202ENST00000343550 ARF6P62330 175 aa14.84□□□□□ -0.03
USF2-202ENST00000343550 SHISA2Q6UWI4 295 aa14.84□□□□□ -0.03
USF2-202ENST00000343550 SAXO1Q8IYX7 474 aa14.84□□□□□ -0.03
USF2-202ENST00000343550 OR5D18Q8NGL1 313 aa14.84□□□□□ -0.03
USF2-202ENST00000343550 C8orf46Q8TAG6 207 aa14.84□□□□□ -0.03
USF2-202ENST00000343550 SLC25A28Q96A46 364 aa14.84□□□□□ -0.03
USF2-202ENST00000343550 ORAI1Q96D31 301 aa14.84□□□□□ -0.03
USF2-202ENST00000343550 RBFOX1Q9NWB1 397 aaKnown RBP14.84□□□□□ -0.03
USF2-202ENST00000343550 CLDN34H7C241 214 aa14.83□□□□□ -0.04
USF2-202ENST00000343550 MAGEB3O15480 346 aa14.83□□□□□ -0.04
USF2-202ENST00000343550 GPX5O75715 221 aa14.83□□□□□ -0.04
USF2-202ENST00000343550 ALDOBP05062 364 aa14.83□□□□□ -0.04
USF2-202ENST00000343550 RNASE1P07998 156 aaKnown RBP14.83□□□□□ -0.04
USF2-202ENST00000343550 MMP9P14780 707 aa14.83□□□□□ -0.04
USF2-202ENST00000343550 ZP1P60852 638 aa14.83□□□□□ -0.04
USF2-202ENST00000343550 MED22Q15528 200 aa14.83□□□□□ -0.04
USF2-202ENST00000343550 C9orf139Q6ZV77 190 aa14.83□□□□□ -0.04
USF2-202ENST00000343550 PRSS48Q7RTY5 328 aa14.83□□□□□ -0.04
USF2-202ENST00000343550 FAM58AQ8N1B3 248 aa14.83□□□□□ -0.04
USF2-202ENST00000343550 TMEM185AQ8NFB2 350 aa14.83□□□□□ -0.04
USF2-202ENST00000343550 OR52N4Q8NGI2 321 aa14.83□□□□□ -0.04
USF2-202ENST00000343550 H1FXQ92522 213 aaKnown RBP14.83□□□□□ -0.04
USF2-202ENST00000343550 WDFY2Q96P53 400 aa14.83□□□□□ -0.04
USF2-202ENST00000343550 SEBOXQ9HB31 216 aaPredicted RBP14.83□□□□□ -0.04
USF2-202ENST00000343550 TOX4O94842 621 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 KDM4BO94953 1096 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 SFTPBP07988 381 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 CHRM2P08172 466 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 TMEM225BP0DP42 221 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 IGFBP3P17936 291 aaPredicted RBP14.82□□□□□ -0.04
USF2-202ENST00000343550 SLC9A3R2Q15599 337 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 ZSCAN4Q8NAM6 433 aaPredicted RBP14.82□□□□□ -0.04
USF2-202ENST00000343550 EMG1Q92979 244 aaKnown RBP14.82□□□□□ -0.04
USF2-202ENST00000343550 OR14A2Q96R54 314 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 PCGF1Q9BSM1 259 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 SIRPDQ9H106 197 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 ELL3Q9HB65 397 aaPredicted RBP14.82□□□□□ -0.04
USF2-202ENST00000343550 HMG20AQ9NP66 347 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 TMEM138Q9NPI0 162 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 IL36RNQ9UBH0 155 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 SOX21Q9Y651 276 aaPredicted RBP14.82□□□□□ -0.04
USF2-202ENST00000343550 TRBV5-7A0A0A0MS05 114 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 A0A1W2PPK0 400 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 WIPF1O43516 503 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 TK1P04183 234 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 CALCBP10092 127 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 TGFBR2P37173 567 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 CAPZA1P52907 286 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 COL10A1Q03692 680 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 GPR50Q13585 617 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 ZNF146Q15072 292 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 PRR31Q5SQ13 230 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 METTL11BQ5VVY1 283 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 SATL1Q86VE3 508 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 TBX15Q96SF7 602 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 CCDC90BQ9GZT6 254 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 RHOFQ9HBH0 211 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 KPTNQ9Y664 436 aa14.82□□□□□ -0.04
USF2-202ENST00000343550 K7N7A8 449 aa14.81□□□□□ -0.04
USF2-202ENST00000343550 PRKACAP17612 351 aa14.81□□□□□ -0.04
USF2-202ENST00000343550 DUSP1P28562 367 aa14.81□□□□□ -0.04
USF2-202ENST00000343550 PPP3R1P63098 170 aa14.81□□□□□ -0.04
USF2-202ENST00000343550 MS4A15Q8N5U1 240 aa14.81□□□□□ -0.04
USF2-202ENST00000343550 GPER1Q99527 375 aa14.81□□□□□ -0.04
USF2-202ENST00000343550 FAM234AQ9H0X4 552 aa14.81□□□□□ -0.04
USF2-202ENST00000343550 Q9H521 79 aa14.81□□□□□ -0.04
USF2-202ENST00000343550 MGAM2Q2M2H8 2515 aa14.8□□□□□ -0.04
USF2-202ENST00000343550 TRAV8-7A0A075B6U6 113 aa14.8□□□□□ -0.04
USF2-202ENST00000343550 TRAV40A0A0B4J280 105 aa14.8□□□□□ -0.04
USF2-202ENST00000343550 GABRPO00591 440 aa14.8□□□□□ -0.04
USF2-202ENST00000343550 PIN1P1O15428 100 aa14.8□□□□□ -0.04
USF2-202ENST00000343550 ZNF737O75373 536 aa14.8□□□□□ -0.04
USF2-202ENST00000343550 EEF1B2P24534 225 aaKnown RBP14.8□□□□□ -0.04
USF2-202ENST00000343550 BDKRB2P30411 391 aa14.8□□□□□ -0.04
USF2-202ENST00000343550 SPIN3Q5JUX0 258 aa14.8□□□□□ -0.04
USF2-202ENST00000343550 FIP1L1Q6UN15 594 aaKnown RBP14.8□□□□□ -0.04
USF2-202ENST00000343550 UNQ9370/PRO34162Q6UXP9 181 aa14.8□□□□□ -0.04
USF2-202ENST00000343550 PXT1Q8NFP0 134 aa14.8□□□□□ -0.04
USF2-202ENST00000343550 CPNE2Q96FN4 548 aaPredicted RBP14.8□□□□□ -0.04
USF2-202ENST00000343550 DERL3Q96Q80 235 aa14.8□□□□□ -0.04
USF2-202ENST00000343550 ZNF696Q9H7X3 374 aa14.8□□□□□ -0.04
USF2-202ENST00000343550 UNKLQ9H9P5 680 aaKnown RBP14.8□□□□□ -0.04
USF2-202ENST00000343550 CKLFQ9UBR5 152 aa14.8□□□□□ -0.04
USF2-202ENST00000343550 BLOC1S6Q9UL45 172 aa14.8□□□□□ -0.04
USF2-202ENST00000343550 TRBV23-1A0A0A0MS06 115 aa14.79□□□□□ -0.04
USF2-202ENST00000343550 HAND1O96004 215 aa14.79□□□□□ -0.04
USF2-202ENST00000343550 ZNF93P35789 620 aaPredicted RBP14.79□□□□□ -0.04
USF2-202ENST00000343550 MAP2K4P45985 399 aa14.79□□□□□ -0.04
USF2-202ENST00000343550 ASCL4Q6XD76 172 aa14.79□□□□□ -0.04
USF2-202ENST00000343550 C1orf122Q6ZSJ8 110 aa14.79□□□□□ -0.04
USF2-202ENST00000343550 Q8N7P7 452 aa14.79□□□□□ -0.04
USF2-202ENST00000343550 SNX22Q96L94 193 aa14.79□□□□□ -0.04
USF2-202ENST00000343550 NKX3-1Q99801 234 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms