RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 WDR25Q64LD2 544 aaPredicted RBP15.83■□□□□ 0.12
SMAD4-201ENST00000342988 GFRALQ6UXV0 394 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 HTR3DQ70Z44 454 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 WFIKKN1Q96NZ8 548 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 SLC48A1Q6P1K1 146 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 WNT7AO00755 349 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 DUSP2Q05923 314 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 EBLN2Q6P2I7 272 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 LINC00052Q96N35 136 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 ZG16BQ96DA0 208 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 GUCD1Q96NT3 240 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 CLEC2DQ9UHP7 191 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 AJAP1Q9UKB5 411 aaPredicted RBP15.83■□□□□ 0.12
SMAD4-201ENST00000342988 FUT7Q11130 342 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 Q96M85 177 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 LAT2Q9GZY6 243 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 FAM24BQ8N5W8 94 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 ADAMTS17Q8TE56 1095 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 ASB5Q8WWX0 329 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 ZNF749O43361 778 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 CDK2AP2O75956 126 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 ASTLQ6HA08 431 aaPredicted RBP15.82■□□□□ 0.12
SMAD4-201ENST00000342988 SSX8Q7RTT4 187 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 BOLA1Q9Y3E2 137 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 OR4A8P0C604 315 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 GPR3P46089 330 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 DGCR2P98153 550 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 ZNF789Q5FWF6 425 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 FGF21Q9NSA1 209 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 INSM1Q01101 510 aaPredicted RBP15.82■□□□□ 0.12
SMAD4-201ENST00000342988 ROM1Q03395 351 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 OR52N5Q8NH56 324 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 MAS1LP35410 378 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 EVX1P49640 407 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 COMPP49747 757 aaPredicted RBP15.82■□□□□ 0.12
SMAD4-201ENST00000342988 ELFN2Q5R3F8 820 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 CMC2Q9NRP2 79 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 DNAJB12Q9NXW2 375 aaKnown RBP15.82■□□□□ 0.12
SMAD4-201ENST00000342988 WNT16Q9UBV4 365 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 H0YIG0 161 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 PTGER1P34995 402 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 PRSS50Q9UI38 385 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 TIMP1P01033 207 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 PXNP49023 591 aaPredicted RBP15.82■□□□□ 0.12
SMAD4-201ENST00000342988 GNG10P50151 68 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 HTR6P50406 440 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 SLC35E3Q7Z769 313 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 OR10J6PQ8NGY7 276 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 TEX101Q9BY14 249 aa15.82■□□□□ 0.12
SMAD4-201ENST00000342988 CD3DP04234 171 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 CADM3Q8N126 398 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 MORN4Q8NDC4 146 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 B3GALT4O96024 378 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 PCMT1P22061 227 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 RNF165Q6ZSG1 346 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 OR4P4Q8NGL7 312 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 OR5M11Q96RB7 305 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 VAX2Q9UIW0 290 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 IL17CQ9P0M4 197 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 MYOM1P52179 1685 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 TMEM64Q6YI46 380 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 NRG4Q8WWG1 115 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 CDCA4Q9BXL8 241 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 NSUN5P2Q63ZY6 315 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 PRSS42Q7Z5A4 293 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 PTRH1Q86Y79 214 aaKnown RBP15.81■□□□□ 0.12
SMAD4-201ENST00000342988 FLYWCH2Q96CP2 140 aaKnown RBP15.81■□□□□ 0.12
SMAD4-201ENST00000342988 EMC6Q9BV81 110 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 ARRDC5A6NEK1 342 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 PLPPR5Q32ZL2 321 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 FAM26EQ8N5C1 309 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 TRGV8A0A0C4DH27 118 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 WNT9BO14905 357 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 IGHV4-34P06331 123 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 MEIG1Q5JSS6 88 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 LIAT1Q6ZQX7 453 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 HINT3Q9NQE9 182 aaKnown RBP15.81■□□□□ 0.12
SMAD4-201ENST00000342988 PHLDA3Q9Y5J5 127 aa15.81■□□□□ 0.12
SMAD4-201ENST00000342988 SPRY3O43610 288 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 HLA-DRB3P79483 266 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 RHBDD2Q6NTF9 364 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 STAC2Q6ZMT1 411 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 FCGR3BO75015 233 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 PABPC1L2AQ5JQF8 200 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 C10orf113Q5VZT2 155 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 OR2W3Q7Z3T1 314 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 SYS1Q8N2H4 156 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 C20orf27Q9GZN8 174 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 FCGR3AP08637 254 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 PSMB5P28074 263 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 DUSP8Q13202 625 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 MRPL16Q9NX20 251 aaKnown RBP15.8■□□□□ 0.12
SMAD4-201ENST00000342988 TMEM108Q6UXF1 575 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 SIRT6Q8N6T7 355 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 ZIC5Q96T25 663 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 NIPSNAP1Q9BPW8 284 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 INHBBP09529 407 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 ALKBH6Q3KRA9 238 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 OR8B3Q8NGG8 313 aa15.8■□□□□ 0.12
SMAD4-201ENST00000342988 NUDCD2Q8WVJ2 157 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms