RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 RNF133Q8WVZ7 376 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 RTN4IP1Q8WWV3 396 aaPredicted RBP16.19■□□□□ 0.18
SMPD1-201ENST00000342245 TMEM37Q8WXS4 190 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 PBOV1Q9GZY1 135 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 RBKSQ9H477 322 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 MOB1AQ9H8S9 216 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 FOXJ2Q9P0K8 574 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 FUT9Q9Y231 359 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 SNRNP200O75643 2136 aaKnown RBP16.19■□□□□ 0.18
SMPD1-201ENST00000342245 EDDM13A0A1B0GTR0 161 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 PPBPP02775 128 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 ZNF728P0DKX0 622 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 TAS2R30P59541 319 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 TCEA2Q15560 299 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 FNDC7Q5VTL7 733 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 TECTBQ96PL2 329 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 TP53RKQ96S44 253 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 PRSS50Q9UI38 385 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 RNF150Q9ULK6 438 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 COA3Q9Y2R0 106 aaPredicted RBP16.19■□□□□ 0.18
SMPD1-201ENST00000342245 FAM24AA6NFZ4 105 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 TNFSF14O43557 240 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 HCRTR2O43614 444 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 HPNP05981 417 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 TUBG1P23258 451 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 SLC6A8P48029 635 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 PTTG1IPP53801 180 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 ELAVL3Q14576 367 aaKnown RBP16.18■□□□□ 0.18
SMPD1-201ENST00000342245 TMEM123Q8N131 208 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 CA13Q8N1Q1 262 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 OR2D3Q8NGH3 330 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 SPIN2AQ99865 258 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 SPIN2BQ9BPZ2 258 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 IGSF23A1L1A6 192 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 SCDO00767 359 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 CT45A8P0DMV1 189 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 CT45A9P0DMV2 189 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 OR3A4PP47883 348 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 NFATC4Q14934 902 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 CT45A2Q5DJT8 189 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 ZNF845Q96IR2 970 aaPredicted RBP16.18■□□□□ 0.18
SMPD1-201ENST00000342245 B3GAT1Q9P2W7 334 aa16.18■□□□□ 0.18
SMPD1-201ENST00000342245 TRAV39A0A0B4J263 110 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 LCN2P80188 198 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 ENDOGQ14249 297 aaKnown RBP16.17■□□□□ 0.18
SMPD1-201ENST00000342245 ATP6V1FQ16864 119 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 TCEAL5Q5H9L2 206 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 FBXO46Q6PJ61 603 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-201ENST00000342245 DGAT2L6Q6ZPD8 337 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 MRGPRGQ86SM5 289 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 TMEM252Q8N6L7 170 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 IL22RA1Q8N6P7 574 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 OR5C1Q8NGR4 320 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 OR2T10Q8NGZ9 312 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 RERGQ96A58 199 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-201ENST00000342245 MOB3AQ96BX8 217 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 ELOVL1Q9BW60 279 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 ELL3Q9HB65 397 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-201ENST00000342245 FAM221AA4D161 298 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 BLVRBP30043 206 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-201ENST00000342245 PAFAH1B2P68402 229 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 ZNF92Q03936 586 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 BSXQ3C1V8 233 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 WDR25Q64LD2 544 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-201ENST00000342245 KCNIP4Q6PIL6 250 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 OR5AS1Q8N127 324 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 MBD3L1Q8WWY6 194 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 MSI2Q96DH6 328 aaKnown RBP16.17■□□□□ 0.18
SMPD1-201ENST00000342245 GPER1Q99527 375 aa16.17■□□□□ 0.18
SMPD1-201ENST00000342245 PHPT1Q9NRX4 125 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-201ENST00000342245 ZNF701Q9NV72 531 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-201ENST00000342245 LOC101059948A0A1B0GTJ6 334 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 PRR19A6NJB7 356 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 ATXN7O15265 892 aaPredicted RBP16.16■□□□□ 0.18
SMPD1-201ENST00000342245 CXCL10P02778 98 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 ERVS71-1P61550 626 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 DCAF7P61962 342 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 ADIRFQ15847 76 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 HNRNPA1L2Q32P51 320 aaKnown RBP16.16■□□□□ 0.18
SMPD1-201ENST00000342245 ZNF787Q6DD87 383 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 SLC39A11Q8N1S5 342 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 CCDC71LQ8N9Z2 235 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 ZNF248Q8NDW4 579 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 SPACA7Q96KW9 195 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 CCDC3Q9BQI4 270 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 HDAC8Q9BY41 377 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 CENPMQ9NSP4 180 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 NECAP2Q9NVZ3 263 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 ANXA10Q9UJ72 324 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 MPDZO75970 2070 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 GZMHP20718 246 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 NKX2-1P43699 371 aaPredicted RBP16.16■□□□□ 0.18
SMPD1-201ENST00000342245 ASCL1P50553 236 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 KIR2DS3Q14952 304 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 BATFQ16520 125 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 SP6Q3SY56 376 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 GCNT2Q8N0V5 402 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 TMEM171Q8WVE6 324 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 KCNE4Q8WWG9 221 aa16.16■□□□□ 0.18
SMPD1-201ENST00000342245 SLC46A1Q96NT5 459 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms