RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 MED6O75586 246 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 FARS2O95363 451 aaKnown RBP12.59□□□□□ -0.39
TDP2-201ENST00000341060 FCGR2CP31995 323 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 RBM11P57052 281 aaKnown RBP12.59□□□□□ -0.39
TDP2-201ENST00000341060 TMEM33P57088 247 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 TCEAL6Q6IPX3 200 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 BRICD5Q6PL45 260 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 CT55Q8WUE5 264 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 PIGCQ92535 297 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 TCEAL3Q969E4 200 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 TMEM45BQ96B21 275 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 ZNF845Q96IR2 970 aaPredicted RBP12.59□□□□□ -0.39
TDP2-201ENST00000341060 C1QTNF5Q9BXJ0 243 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 TMEM231Q9H6L2 316 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 PLEKHA2Q9HB19 425 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 R4GN57 208 aa12.59□□□□□ -0.39
TDP2-201ENST00000341060 FAM221AA4D161 298 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 PINLYPA6NC86 204 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 ZNF205O95201 554 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 SNAPINO95295 136 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 SERPINA7P05543 415 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 ACP1P24666 158 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 FXYD4P59646 89 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 SPAG16Q8N0X2 631 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 MOB3AQ96BX8 217 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 NRIP2Q9BQI9 281 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 ADAT1Q9BUB4 502 aaKnown RBP12.58□□□□□ -0.4
TDP2-201ENST00000341060 ATPIF1Q9UII2 106 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 ZNF587BE7ETH6 402 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 MBPP02686 304 aaPredicted RBP12.58□□□□□ -0.4
TDP2-201ENST00000341060 PMELP40967 661 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 UCP3P55916 312 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 FOXO1Q12778 655 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 MALLQ13021 153 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 SP6Q3SY56 376 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 DHRS7BQ6IAN0 325 aaPredicted RBP12.58□□□□□ -0.4
TDP2-201ENST00000341060 C6orf15Q6UXA7 325 aaPredicted RBP12.58□□□□□ -0.4
TDP2-201ENST00000341060 Q6ZPA2 131 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 TIPARPQ7Z3E1 657 aaKnown RBP12.58□□□□□ -0.4
TDP2-201ENST00000341060 CALHM1Q8IU99 346 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 ZNF611Q8N823 705 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 UBAC2Q8NBM4 344 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 WNT2BQ93097 391 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 POM121Q96HA1 1249 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 ARRDC1-AS1Q9H2J1 176 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 PARP11Q9NR21 331 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 P4HTMQ9NXG6 502 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 RCC2Q9P258 522 aaKnown RBP12.58□□□□□ -0.4
TDP2-201ENST00000341060 NDRG3Q9UGV2 375 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 STARD10Q9Y365 291 aa12.58□□□□□ -0.4
TDP2-201ENST00000341060 ARHGAP21Q5T5U3 1957 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 E5RGE8 158 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 SCGB1D2O95969 90 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 MUC1P15941 1255 aaPredicted RBP12.57□□□□□ -0.4
TDP2-201ENST00000341060 NME2P22392 152 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 F2RL1P55085 397 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 DAZAP2Q15038 168 aaPredicted RBP12.57□□□□□ -0.4
TDP2-201ENST00000341060 TMEM211Q6ICI0 200 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 TMEM88Q6PEY1 159 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 HAGHLQ6PII5 290 aaPredicted RBP12.57□□□□□ -0.4
TDP2-201ENST00000341060 BTNL8Q6UX41 500 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 LIAT1Q6ZQX7 453 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 COLCA1Q6ZS62 124 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 CPEB3Q8NE35 698 aaKnown RBP12.57□□□□□ -0.4
TDP2-201ENST00000341060 PSMF1Q92530 271 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 MSI2Q96DH6 328 aaKnown RBP12.57□□□□□ -0.4
TDP2-201ENST00000341060 C18orf12Q96KH6 178 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 PARPBPQ9NWS1 579 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 NSG2Q9Y328 171 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 LOXL2Q9Y4K0 774 aa12.57□□□□□ -0.4
TDP2-201ENST00000341060 IGKV3D-15A0A087WSY6 115 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 H7C1Q1 480 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 LINC01387J3KSC0 135 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 FBXO24O75426 580 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 FUT3P21217 361 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 FLI1Q01543 452 aaPredicted RBP12.56□□□□□ -0.4
TDP2-201ENST00000341060 HFEQ30201 348 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 PHLDA2Q53GA4 152 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 TSPO2Q5TGU0 170 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 LYZL2Q7Z4W2 148 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 GLYATL2Q8WU03 294 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 SYT3Q9BQG1 590 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 BOKQ9UMX3 212 aaPredicted RBP12.56□□□□□ -0.4
TDP2-201ENST00000341060 NOSIPQ9Y314 301 aaKnown RBP12.56□□□□□ -0.4
TDP2-201ENST00000341060 FAM96BQ9Y3D0 163 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 MPLP40238 635 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 GLP1RP43220 463 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 CBLN2Q8IUK8 224 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 Q8NFD4 153 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 OR5L1Q8NGL2 311 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 LYPD6BQ8NI32 183 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 ZPBPQ9BS86 351 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 RSRP1Q9BUV0 290 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 LINC00470Q9BZP3 86 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 ZNF442Q9H7R0 627 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 ZFP57Q9NU63 452 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 PLA2G2EQ9NZK7 142 aa12.56□□□□□ -0.4
TDP2-201ENST00000341060 MRPL33O75394 65 aaKnown RBP12.55□□□□□ -0.4
TDP2-201ENST00000341060 OR7C1O76099 320 aaPredicted RBP12.55□□□□□ -0.4
TDP2-201ENST00000341060 F10P00742 488 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms