RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 SULT1A1P50225 295 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 SKP2Q13309 424 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 DGAT2L7PQ6IED9 249 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 SPNS3Q6ZMD2 512 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 MRPL24Q96A35 216 aaKnown RBP7.73□□□□□ -1.17
RTN3-202ENST00000339997 DCAF16Q9NXF7 216 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 ELF5Q9UKW6 265 aaPredicted RBP7.73□□□□□ -1.17
RTN3-202ENST00000339997 LINC01565O15544 149 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 SFT2D2O95562 160 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 CST2P09228 141 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 PPP1CBP62140 327 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 PPIAP62937 165 aaKnown RBP7.73□□□□□ -1.17
RTN3-202ENST00000339997 ZNF154Q13106 437 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 FFAR4Q5NUL3 377 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 DPPA3Q6W0C5 159 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 PUSL1Q8N0Z8 303 aaKnown RBP7.73□□□□□ -1.17
RTN3-202ENST00000339997 NHLRC2Q8NBF2 726 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 SLC24A4Q8NFF2 622 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 OR2M7Q8NG81 312 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 LHFPL5Q8TAF8 219 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 PLA2G3Q9NZ20 509 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 ZNF407Q9C0G0 2248 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 GPR179Q6PRD1 2367 aa7.73□□□□□ -1.17
RTN3-202ENST00000339997 BRWD3Q6RI45 1802 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 CRYAAP02489 173 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 CRHP06850 196 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 NMBP08949 121 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 CALCRP30988 508 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 FAM3AP98173 230 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 RUNX1Q01196 453 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 LYZL2Q7Z4W2 148 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 CDC20BQ86Y33 519 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 ZNF683Q8IZ20 524 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 EDAQ92838 391 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 PACRGQ96M98 296 aaPredicted RBP7.72□□□□□ -1.17
RTN3-202ENST00000339997 DUSP23Q9BVJ7 150 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 PPP1R3EQ9H7J1 279 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 IGHV5-51A0A0C4DH38 117 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 DUS4LO95620 317 aaKnown RBP7.72□□□□□ -1.17
RTN3-202ENST00000339997 RNF224P0DH78 156 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 G6PCP35575 357 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 NANOS3P60323 173 aaKnown RBP7.72□□□□□ -1.17
RTN3-202ENST00000339997 ACOT6Q3I5F7 207 aaPredicted RBP7.72□□□□□ -1.17
RTN3-202ENST00000339997 COMMD5Q9GZQ3 224 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 TREM2Q9NZC2 230 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 FUT9Q9Y231 359 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 NUDT19A8MXV4 375 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 CRXO43186 299 aaPredicted RBP7.72□□□□□ -1.17
RTN3-202ENST00000339997 SMIM17P0DL12 118 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 APELAP0DMC3 54 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 TBC1D28Q2M2D7 210 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 FBXO46Q6PJ61 603 aaPredicted RBP7.72□□□□□ -1.17
RTN3-202ENST00000339997 DGAT2L6Q6ZPD8 337 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 HSD17B13Q7Z5P4 300 aaPredicted RBP7.72□□□□□ -1.17
RTN3-202ENST00000339997 SPICQ8N5J4 248 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 TIMD4Q96H15 378 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 SLC35E1Q96K37 410 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 OXGR1Q96P68 337 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 A0A1W2PRD5 423 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 A0A1W2PRF3 423 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 A0A1W2PRM7 423 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 SH2D1BO14796 132 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 ZNF737O75373 536 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 FUT3P21217 361 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 CEACAM6P40199 344 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 GNG10P50151 68 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 OR5I1Q13606 314 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 TMEM241Q24JQ0 296 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 HLA-BQ31612 363 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 OR2I1PQ8NGU4 316 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 BLNKQ8WV28 456 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 ALG14Q96F25 216 aa7.72□□□□□ -1.17
RTN3-202ENST00000339997 ZFHX4Q86UP3 3567 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 LOC285556D6RIA3 1793 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 FRYLO94915 3013 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 COL11A2P13942 1736 aaPredicted RBP7.71□□□□□ -1.17
RTN3-202ENST00000339997 SERPINE3A8MV23 424 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 M0R1X1 148 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 GALR2O43603 387 aaPredicted RBP7.71□□□□□ -1.17
RTN3-202ENST00000339997 FCGR3BO75015 233 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 EML2O95834 649 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 VSIG10L2P0DP72 767 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 RAB5AP20339 215 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 CAPZBP47756 277 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 DLK1P80370 383 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 RPL24P83731 157 aaKnown RBP7.71□□□□□ -1.17
RTN3-202ENST00000339997 PRSS54Q6PEW0 395 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 BTNL3Q6UXE8 466 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 ZNF485Q8NCK3 441 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 OR5D13Q8NGL4 314 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 SLC25A43Q8WUT9 341 aaPredicted RBP7.71□□□□□ -1.17
RTN3-202ENST00000339997 OR2A5Q96R48 311 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 DECR2Q9NUI1 292 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 EXOGQ9Y2C4 368 aaKnown RBP7.71□□□□□ -1.17
RTN3-202ENST00000339997 COL6A6A6NMZ7 2263 aa7.71□□□□□ -1.17
RTN3-202ENST00000339997 TRIOO75962 3097 aa7.71□□□□□ -1.18
RTN3-202ENST00000339997 CHST1O43916 411 aa7.71□□□□□ -1.18
RTN3-202ENST00000339997 FPR2P25090 351 aa7.71□□□□□ -1.18
RTN3-202ENST00000339997 NHLH2Q02577 135 aa7.71□□□□□ -1.18
RTN3-202ENST00000339997 MESP2Q0VG99 397 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms